Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9d-3A0A075B695 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Gm13146-201ENSMUST00000118508 780 ntBASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Dmtn-210ENSMUST00000228824 2377 ntBASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9d-3A0A075B695 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-3A0A075B695 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-3A0A075B695 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-3A0A075B695 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-3A0A075B695 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-3A0A075B695 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav9d-3A0A075B695 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav9d-3A0A075B695 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav9d-3A0A075B695 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-3A0A075B695 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-3A0A075B695 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-3A0A075B695 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-3A0A075B695 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-3A0A075B695 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-3A0A075B695 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-3A0A075B695 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-3A0A075B695 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9d-3A0A075B695 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-3A0A075B695 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-3A0A075B695 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav9d-3A0A075B695 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.98□□□□□ -0.33
Trav9d-3A0A075B695 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-3A0A075B695 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav9d-3A0A075B695 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Trav9d-3A0A075B695 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-3A0A075B695 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav9d-3A0A075B695 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Trav9d-3A0A075B695 Gm18671-201ENSMUST00000214826 683 ntBASIC12.98□□□□□ -0.33
Trav9d-3A0A075B695 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav9d-3A0A075B695 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav9d-3A0A075B695 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-3A0A075B695 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-3A0A075B695 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-3A0A075B695 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9d-3A0A075B695 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.97□□□□□ -0.33
Trav9d-3A0A075B695 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Trav9d-3A0A075B695 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav9d-3A0A075B695 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-3A0A075B695 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-3A0A075B695 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-3A0A075B695 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav9d-3A0A075B695 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-3A0A075B695 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-3A0A075B695 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-3A0A075B695 Gm5874-201ENSMUST00000096101 508 ntBASIC12.97□□□□□ -0.33
Trav9d-3A0A075B695 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav9d-3A0A075B695 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-3A0A075B695 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-3A0A075B695 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-3A0A075B695 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav9d-3A0A075B695 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-3A0A075B695 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-3A0A075B695 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-3A0A075B695 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-3A0A075B695 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-3A0A075B695 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav9d-3A0A075B695 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav9d-3A0A075B695 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-3A0A075B695 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-3A0A075B695 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Trav9d-3A0A075B695 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-3A0A075B695 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-3A0A075B695 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav9d-3A0A075B695 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav9d-3A0A075B695 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9d-3A0A075B695 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9d-3A0A075B695 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Trav9d-3A0A075B695 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9d-3A0A075B695 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav9d-3A0A075B695 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-3A0A075B695 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-3A0A075B695 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav9d-3A0A075B695 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC12.95□□□□□ -0.34
Trav9d-3A0A075B695 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms