Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Smad6-203ENSMUST00000179458 273 ntBASIC14.47□□□□□ -0.09
Trav17A0A075B655 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.47□□□□□ -0.09
Trav17A0A075B655 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav17A0A075B655 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav17A0A075B655 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav17A0A075B655 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav17A0A075B655 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav17A0A075B655 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav17A0A075B655 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav17A0A075B655 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav17A0A075B655 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Trav17A0A075B655 Fst-202ENSMUST00000223640 2612 ntBASIC14.46□□□□□ -0.09
Trav17A0A075B655 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav17A0A075B655 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav17A0A075B655 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav17A0A075B655 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav17A0A075B655 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav17A0A075B655 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav17A0A075B655 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav17A0A075B655 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav17A0A075B655 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav17A0A075B655 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav17A0A075B655 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav17A0A075B655 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav17A0A075B655 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav17A0A075B655 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav17A0A075B655 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav17A0A075B655 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav17A0A075B655 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav17A0A075B655 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.45□□□□□ -0.1
Trav17A0A075B655 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav17A0A075B655 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav17A0A075B655 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav17A0A075B655 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav17A0A075B655 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav17A0A075B655 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trav17A0A075B655 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav17A0A075B655 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav17A0A075B655 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav17A0A075B655 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav17A0A075B655 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav17A0A075B655 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav17A0A075B655 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav17A0A075B655 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav17A0A075B655 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav17A0A075B655 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav17A0A075B655 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav17A0A075B655 Gm9847-201ENSMUST00000052528 599 ntBASIC14.44□□□□□ -0.1
Trav17A0A075B655 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav17A0A075B655 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav17A0A075B655 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav17A0A075B655 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav17A0A075B655 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav17A0A075B655 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav17A0A075B655 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav17A0A075B655 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav17A0A075B655 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.43□□□□□ -0.1
Trav17A0A075B655 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav17A0A075B655 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.43□□□□□ -0.1
Trav17A0A075B655 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav17A0A075B655 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms