Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC12.24□□□□□ -0.45
Trav13-2A0A075B649 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-2A0A075B649 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC12.24□□□□□ -0.45
Trav13-2A0A075B649 Gm45102-201ENSMUST00000207427 857 ntBASIC12.24□□□□□ -0.45
Trav13-2A0A075B649 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.24□□□□□ -0.45
Trav13-2A0A075B649 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-2A0A075B649 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-2A0A075B649 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-2A0A075B649 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-2A0A075B649 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-2A0A075B649 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-2A0A075B649 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav13-2A0A075B649 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Gm5576-201ENSMUST00000075809 1236 ntBASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Gm37811-201ENSMUST00000192416 2601 ntBASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav13-2A0A075B649 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav13-2A0A075B649 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 Gm42900-201ENSMUST00000197184 2167 ntBASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav13-2A0A075B649 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13-2A0A075B649 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.21□□□□□ -0.46
Trav13-2A0A075B649 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav13-2A0A075B649 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13-2A0A075B649 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13-2A0A075B649 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13-2A0A075B649 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13-2A0A075B649 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13-2A0A075B649 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav13-2A0A075B649 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.21□□□□□ -0.46
Trav13-2A0A075B649 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
Trav13-2A0A075B649 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC12.2□□□□□ -0.46
Trav13-2A0A075B649 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms