Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav12-3A0A075B648 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav12-3A0A075B648 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-3A0A075B648 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-3A0A075B648 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-3A0A075B648 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-3A0A075B648 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav12-3A0A075B648 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav12-3A0A075B648 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav12-3A0A075B648 Gm9806-201ENSMUST00000051080 552 ntBASIC13.29□□□□□ -0.28
Trav12-3A0A075B648 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav12-3A0A075B648 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Gm8503-201ENSMUST00000118131 455 ntBASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav12-3A0A075B648 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12-3A0A075B648 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav12-3A0A075B648 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12-3A0A075B648 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav12-3A0A075B648 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Trav12-3A0A075B648 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav12-3A0A075B648 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Trav12-3A0A075B648 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-3A0A075B648 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-3A0A075B648 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-3A0A075B648 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-3A0A075B648 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-3A0A075B648 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-3A0A075B648 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-3A0A075B648 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-3A0A075B648 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Trav12-3A0A075B648 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Scarna2-201ENSMUST00000157560 414 ntBASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Trav12-3A0A075B648 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 Gm43530-201ENSMUST00000195920 274 ntBASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav12-3A0A075B648 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trav12-3A0A075B648 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav12-3A0A075B648 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms