Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav4d-3A0A075B625 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4d-3A0A075B625 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4d-3A0A075B625 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4d-3A0A075B625 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4d-3A0A075B625 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4d-3A0A075B625 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4d-3A0A075B625 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.4□□□□□ -0.42
Trav4d-3A0A075B625 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trav4d-3A0A075B625 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4d-3A0A075B625 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4d-3A0A075B625 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4d-3A0A075B625 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4d-3A0A075B625 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4d-3A0A075B625 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trav4d-3A0A075B625 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4d-3A0A075B625 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4d-3A0A075B625 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav4d-3A0A075B625 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav4d-3A0A075B625 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav4d-3A0A075B625 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav4d-3A0A075B625 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Gm9870-201ENSMUST00000063874 645 ntBASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4d-3A0A075B625 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Gm9194-201ENSMUST00000220749 1447 ntBASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav4d-3A0A075B625 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav4d-3A0A075B625 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms