Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6n-5A0A075B621 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6n-5A0A075B621 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6n-5A0A075B621 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.13□□□□□ -0.15
Trav6n-5A0A075B621 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6n-5A0A075B621 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-5A0A075B621 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-5A0A075B621 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Tgds-204ENSMUST00000228543 1594 ntBASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Gm7860-201ENSMUST00000121190 879 ntBASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Gm7417-201ENSMUST00000192950 473 ntBASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-5A0A075B621 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6n-5A0A075B621 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.09□□□□□ -0.15
Trav6n-5A0A075B621 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6n-5A0A075B621 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6n-5A0A075B621 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav6n-5A0A075B621 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6n-5A0A075B621 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.09□□□□□ -0.15
Trav6n-5A0A075B621 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6n-5A0A075B621 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6n-5A0A075B621 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6n-5A0A075B621 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
Trav6n-5A0A075B621 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav6n-5A0A075B621 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6n-5A0A075B621 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6n-5A0A075B621 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6n-5A0A075B621 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6n-5A0A075B621 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6n-5A0A075B621 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav6n-5A0A075B621 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms