Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Gm26524-201ENSMUST00000192339 390 ntBASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Rab3c-203ENSMUST00000224180 967 ntBASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-1A0A075B606 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-1A0A075B606 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Gm12527-201ENSMUST00000117967 564 ntBASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-1A0A075B606 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Gm19094-201ENSMUST00000209791 1246 ntBASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Gm20049-201ENSMUST00000219950 730 ntBASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-1A0A075B606 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms