Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm4340-203ENSMUST00000181615 1258 ntAPPRIS P5 TSL 2 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm37632-201ENSMUST00000191811 1142 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm5723-201ENSMUST00000203096 432 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm5305-201ENSMUST00000204010 746 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm45157-201ENSMUST00000208729 401 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm7943-201ENSMUST00000212078 1034 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 AC154424.1-201ENSMUST00000225883 799 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm2531-201ENSMUST00000075609 512 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm43162-201ENSMUST00000198292 1770 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm42440-201ENSMUST00000197906 2284 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 AC187103.1-201ENSMUST00000224641 1475 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm42658-201ENSMUST00000197199 1575 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm29761-201ENSMUST00000215964 1939 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Mir688-201ENSMUST00000102055 75 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Mir546-201ENSMUST00000102105 121 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm13930-201ENSMUST00000118569 368 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm15096-201ENSMUST00000121918 878 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm15056-201ENSMUST00000122025 549 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm25969-201ENSMUST00000157166 132 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm23891-201ENSMUST00000158114 138 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm7651-201ENSMUST00000173398 901 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm23018-201ENSMUST00000177928 109 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm27596-201ENSMUST00000185061 83 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm18875-201ENSMUST00000188563 882 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm19057-201ENSMUST00000194329 1197 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm44111-201ENSMUST00000204649 399 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm29759-201ENSMUST00000205860 327 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm38387-201ENSMUST00000191945 2577 ntBASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Ddx56Q9D0R4 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm42503-201ENSMUST00000199080 3706 ntBASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Ddx56Q9D0R4 Gm37410-201ENSMUST00000193623 3039 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms