Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Msh4Q99MT2 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.55□□□□□ -1.36
Msh4Q99MT2 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.55□□□□□ -1.36
Msh4Q99MT2 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh4Q99MT2 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.55□□□□□ -1.36
Msh4Q99MT2 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.55□□□□□ -1.36
Msh4Q99MT2 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh4Q99MT2 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh4Q99MT2 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Msh4Q99MT2 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh4Q99MT2 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.55□□□□□ -1.36
Msh4Q99MT2 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
Msh4Q99MT2 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Msh4Q99MT2 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.55□□□□□ -1.36
Msh4Q99MT2 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh4Q99MT2 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Msh4Q99MT2 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh4Q99MT2 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh4Q99MT2 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Msh4Q99MT2 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.55□□□□□ -1.36
Msh4Q99MT2 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Msh4Q99MT2 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Msh4Q99MT2 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh4Q99MT2 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh4Q99MT2 AC022682.2-202ENSMUST00000224394 3943 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh4Q99MT2 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm9030-201ENSMUST00000218405 2410 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm9029-201ENSMUST00000219232 2410 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Mir760-201ENSMUST00000103257 119 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm7821-201ENSMUST00000117111 788 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm14938-201ENSMUST00000119482 943 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm13877-201ENSMUST00000120614 417 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm5578-201ENSMUST00000121490 1236 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm15242-201ENSMUST00000122459 283 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm24545-201ENSMUST00000158651 85 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm20637-201ENSMUST00000175715 462 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Mir7669-201ENSMUST00000183442 58 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm34144-201ENSMUST00000197039 259 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm42824-201ENSMUST00000199361 247 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm17822-201ENSMUST00000204307 351 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm19039-201ENSMUST00000204363 575 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 AC122924.1-201ENSMUST00000222044 163 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm2754-201ENSMUST00000223383 589 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Msh4Q99MT2 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.54□□□□□ -1.36
Msh4Q99MT2 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.53□□□□□ -1.36
Msh4Q99MT2 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh4Q99MT2 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Msh4Q99MT2 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh4Q99MT2 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Msh4Q99MT2 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Msh4Q99MT2 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh4Q99MT2 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Msh4Q99MT2 CT009696.4-202ENSMUST00000213560 2248 ntTSL 5 BASIC6.53□□□□□ -1.36
Msh4Q99MT2 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Msh4Q99MT2 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Msh4Q99MT2 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Msh4Q99MT2 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Msh4Q99MT2 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms