Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Scrt1Q99M85 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Scrt1Q99M85 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Scrt1Q99M85 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Scrt1Q99M85 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Scrt1Q99M85 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Scrt1Q99M85 AC139754.2-201ENSMUST00000218037 1455 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Scrt1Q99M85 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Sec24c-202ENSMUST00000223751 4196 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Mir697-201ENSMUST00000102316 109 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm11256-201ENSMUST00000118109 829 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm4992-201ENSMUST00000120256 768 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm14796-201ENSMUST00000121216 959 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm16027-201ENSMUST00000161618 758 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm4152-201ENSMUST00000172675 259 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Mir7235-201ENSMUST00000183796 56 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm27601-201ENSMUST00000184794 127 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm37295-201ENSMUST00000192186 109 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm6077-201ENSMUST00000196008 499 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm3511-201ENSMUST00000199823 204 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm44982-201ENSMUST00000208795 471 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm7499-201ENSMUST00000210423 813 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC5.9□□□□□ -1.46
Scrt1Q99M85 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm4803-201ENSMUST00000218729 1279 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 AC154219.1-201ENSMUST00000220764 1262 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 AL591207.2-201ENSMUST00000222991 337 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Vmn1r41-205ENSMUST00000227630 827 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Scrt1Q99M85 Snora21-201ENSMUST00000082967 137 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Gm20749-201ENSMUST00000186319 3492 ntBASIC5.9□□□□□ -1.46
Scrt1Q99M85 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Scrt1Q99M85 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Scrt1Q99M85 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC5.9□□□□□ -1.47
Scrt1Q99M85 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Scrt1Q99M85 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm37283-201ENSMUST00000193111 1571 ntBASIC5.89□□□□□ -1.47
Scrt1Q99M85 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Ide-201ENSMUST00000131070 4962 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm37653-201ENSMUST00000195401 3578 ntBASIC5.89□□□□□ -1.47
Scrt1Q99M85 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Mlip-211ENSMUST00000184415 1726 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm13772-201ENSMUST00000118431 317 ntBASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm13835-201ENSMUST00000118459 685 ntBASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm15194-201ENSMUST00000120453 434 ntBASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm13430-201ENSMUST00000121366 288 ntBASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm14251-201ENSMUST00000122133 279 ntBASIC5.89□□□□□ -1.47
Scrt1Q99M85 Mir1907-201ENSMUST00000122509 90 ntBASIC5.89□□□□□ -1.47
Scrt1Q99M85 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm4613-201ENSMUST00000165488 276 ntBASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm25574-201ENSMUST00000175245 249 ntBASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm22701-201ENSMUST00000175371 291 ntBASIC5.89□□□□□ -1.47
Scrt1Q99M85 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm43501-201ENSMUST00000202513 107 ntBASIC5.89□□□□□ -1.47
Scrt1Q99M85 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm32983-201ENSMUST00000208500 505 ntBASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC5.89□□□□□ -1.47
Scrt1Q99M85 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm5080-201ENSMUST00000220341 743 ntBASIC5.89□□□□□ -1.47
Scrt1Q99M85 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Gm2840-201ENSMUST00000048361 411 ntBASIC5.89□□□□□ -1.47
Scrt1Q99M85 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Scrt1Q99M85 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 299 ms