Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Mir1932-201ENSMUST00000157390 90 ntBASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm25363-201ENSMUST00000158850 245 ntBASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm43555-201ENSMUST00000196588 310 ntBASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm17824-201ENSMUST00000197690 805 ntBASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm44239-201ENSMUST00000204228 271 ntBASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Olfr1214-202ENSMUST00000216026 2126 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm43519-201ENSMUST00000197239 1872 ntBASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gm42763-201ENSMUST00000199595 2087 ntBASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Col6a6Q8C6K9 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Zfp939-202ENSMUST00000186855 2480 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Gm23739-201ENSMUST00000102295 108 ntBASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Gm15366-201ENSMUST00000118433 1019 ntBASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Gm11504-201ENSMUST00000120211 173 ntBASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Gm6931-201ENSMUST00000183103 371 ntBASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Gm18914-201ENSMUST00000214625 616 ntBASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Gm18103-201ENSMUST00000216621 779 ntBASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Gm9269-201ENSMUST00000221661 578 ntBASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Gm2139-201ENSMUST00000222569 1075 ntBASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 AC154834.1-201ENSMUST00000224697 358 ntBASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
Col6a6Q8C6K9 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Gm28112-201ENSMUST00000190898 1875 ntBASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Gm17173-201ENSMUST00000168000 2867 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Gm12193-201ENSMUST00000117250 379 ntBASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Gm12565-201ENSMUST00000119004 649 ntBASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Gm6631-201ENSMUST00000193699 559 ntBASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Gm43029-201ENSMUST00000201829 1535 ntBASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Col6a6Q8C6K9 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a6Q8C6K9 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC5.95□□□□□ -1.46
Col6a6Q8C6K9 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col6a6Q8C6K9 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a6Q8C6K9 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a6Q8C6K9 AC116476.1-201ENSMUST00000226274 2318 ntBASIC5.95□□□□□ -1.46
Col6a6Q8C6K9 Gm44553-201ENSMUST00000206316 2037 ntBASIC5.95□□□□□ -1.46
Col6a6Q8C6K9 Sema6d-205ENSMUST00000103238 3165 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a6Q8C6K9 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a6Q8C6K9 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Col6a6Q8C6K9 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a6Q8C6K9 Gm7700-201ENSMUST00000120273 970 ntBASIC5.95□□□□□ -1.46
Col6a6Q8C6K9 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Col6a6Q8C6K9 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms