Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Gm25093-201ENSMUST00000103993 132 ntBASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Gm12842-201ENSMUST00000117298 476 ntBASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Gm11689-201ENSMUST00000120766 302 ntBASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Gm8895-201ENSMUST00000172300 1223 ntBASIC6.75□□□□□ -1.33
Trub1Q8C0D0 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Gm9504-201ENSMUST00000196322 468 ntBASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Gm44896-201ENSMUST00000206190 772 ntBASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Gm5324-201ENSMUST00000208115 476 ntBASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Gm9788-201ENSMUST00000057038 906 ntBASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Mir425-201ENSMUST00000083645 85 ntBASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Gm38156-201ENSMUST00000194601 2260 ntBASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Gm10773-201ENSMUST00000218071 3935 ntBASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Cdc42bpa-202ENSMUST00000097450 5160 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Trub1Q8C0D0 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm37863-201ENSMUST00000194911 1457 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm25593-201ENSMUST00000102272 96 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm14733-201ENSMUST00000117680 133 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm13444-201ENSMUST00000119445 522 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm15842-201ENSMUST00000120513 618 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm5578-201ENSMUST00000121490 1236 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm11434-201ENSMUST00000122379 629 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm16330-201ENSMUST00000128324 297 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm15501-202ENSMUST00000140687 625 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm22094-201ENSMUST00000158976 117 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm27186-201ENSMUST00000184223 307 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm28023-201ENSMUST00000184556 60 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm27825-201ENSMUST00000184586 60 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Ighv1-21-201ENSMUST00000194856 351 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm8454-201ENSMUST00000196980 811 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm2225-201ENSMUST00000209570 377 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 AC122459.3-201ENSMUST00000228508 1042 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Gm42989-201ENSMUST00000200646 2306 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trub1Q8C0D0 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.73□□□□□ -1.33
Trub1Q8C0D0 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.73□□□□□ -1.33
Trub1Q8C0D0 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 164.6 ms