Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Brd9-206ENSMUST00000222399 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Mpp1-201ENSMUST00000033775 2525 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Dync1i2-206ENSMUST00000112140 2573 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Trim35Q8C006 Mcm5-203ENSMUST00000212426 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Knstrn-206ENSMUST00000134661 4602 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Rab27a-203ENSMUST00000184146 3168 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm20682-201ENSMUST00000176552 3517 ntTSL 5 BASIC9.44□□□□□ -0.9
Trim35Q8C006 Thrb-202ENSMUST00000022304 6200 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm14292-201ENSMUST00000118761 456 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm11344-201ENSMUST00000122011 335 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm371-201ENSMUST00000142240 1245 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm17147-201ENSMUST00000164176 432 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 Ear-ps5-201ENSMUST00000164700 463 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm25694-201ENSMUST00000175448 282 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trim35Q8C006 Scgb1b11-201ENSMUST00000186031 418 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm5334-201ENSMUST00000187472 720 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 9030619P08Rik-202ENSMUST00000190141 435 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm2021-201ENSMUST00000190623 464 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm2053-201ENSMUST00000195671 631 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm3010-201ENSMUST00000198805 448 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm42871-201ENSMUST00000199333 315 ntTSL 5 BASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm45225-201ENSMUST00000206852 1139 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm17766-201ENSMUST00000209223 442 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 Nosip-207ENSMUST00000210520 534 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trim35Q8C006 Cx3cl1-206ENSMUST00000211956 470 ntTSL 2 BASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm45780-201ENSMUST00000212089 224 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm35298-201ENSMUST00000222719 430 ntTSL 5 BASIC9.44□□□□□ -0.9
Trim35Q8C006 AC120553.1-201ENSMUST00000227313 260 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 Acad10-201ENSMUST00000031412 3826 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Mif-201ENSMUST00000038169 544 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trim35Q8C006 Zfp84-201ENSMUST00000032802 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm5397-201ENSMUST00000121081 1453 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 2700029L08Rik-201ENSMUST00000202895 1465 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Trim35Q8C006 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC9.44□□□□□ -0.9
Trim35Q8C006 BB014433-203ENSMUST00000179941 1543 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm4925-202ENSMUST00000168843 1561 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm12014-201ENSMUST00000120164 1620 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 AC164437.2-202ENSMUST00000227367 1639 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm11231-201ENSMUST00000117895 1706 ntBASIC9.44□□□□□ -0.9
Trim35Q8C006 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Myo15b-207ENSMUST00000167507 1785 ntTSL 5 BASIC9.44□□□□□ -0.9
Trim35Q8C006 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Btn2a2-202ENSMUST00000110432 2089 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Stk38l-202ENSMUST00000111644 2274 ntTSL 5 BASIC9.44□□□□□ -0.9
Trim35Q8C006 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Ikzf2-207ENSMUST00000190771 2483 ntTSL 5 BASIC9.44□□□□□ -0.9
Trim35Q8C006 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trim35Q8C006 Pcdhb7-201ENSMUST00000053037 3501 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trim35Q8C006 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Trim66-201ENSMUST00000033339 4354 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Stat1-203ENSMUST00000186057 3998 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Sdc2-201ENSMUST00000022871 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Gucy2d-201ENSMUST00000098274 3537 ntTSL 5 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Chat-201ENSMUST00000070125 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm43756-201ENSMUST00000199788 2838 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Fyb-201ENSMUST00000090461 2669 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Kcnip4-204ENSMUST00000166924 2257 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Mill2-206ENSMUST00000228493 2043 ntAPPRIS P4 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm26638-201ENSMUST00000181762 1924 ntTSL 5 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Lrit1-201ENSMUST00000120052 4325 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Sdcbp2-201ENSMUST00000028950 1399 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm44992-210ENSMUST00000210126 1330 ntTSL 5 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Eprn-201ENSMUST00000223470 1306 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Tmem254c-201ENSMUST00000100818 1066 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Mageb2-201ENSMUST00000101397 1143 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Mir1190-201ENSMUST00000116925 96 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm14729-201ENSMUST00000118373 689 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm7180-201ENSMUST00000121753 513 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm12826-201ENSMUST00000121841 379 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm15635-201ENSMUST00000127834 371 ntTSL 3 BASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Trim35Q8C006 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm8941-201ENSMUST00000181451 899 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm8391-201ENSMUST00000185632 726 ntBASIC9.43□□□□□ -0.9
Trim35Q8C006 Gm38007-201ENSMUST00000192187 313 ntBASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms