Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp47Q8BY87 Gm13400-201ENSMUST00000117436 380 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 Gm14375-201ENSMUST00000119490 855 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 Gm12140-201ENSMUST00000121214 544 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 Gm13642-201ENSMUST00000121697 381 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC9.26□□□□□ -0.93
Usp47Q8BY87 Gm25219-201ENSMUST00000157545 330 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 Gm23343-201ENSMUST00000158964 143 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 Gm22548-201ENSMUST00000174899 78 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC9.26□□□□□ -0.93
Usp47Q8BY87 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usp47Q8BY87 Gm3321-201ENSMUST00000200603 1129 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 Gm18805-201ENSMUST00000206872 655 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 AC155941.3-201ENSMUST00000218476 308 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 Gm9321-201ENSMUST00000221179 778 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Usp47Q8BY87 Mir484-201ENSMUST00000093566 67 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp47Q8BY87 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp47Q8BY87 Lpp-201ENSMUST00000038053 15647 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp47Q8BY87 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usp47Q8BY87 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 AC140393.3-201ENSMUST00000228396 1352 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 AC158537.1-201ENSMUST00000224637 1711 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usp47Q8BY87 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC9.26□□□□□ -0.93
Usp47Q8BY87 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usp47Q8BY87 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Usp47Q8BY87 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC9.26□□□□□ -0.93
Usp47Q8BY87 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC9.26□□□□□ -0.93
Usp47Q8BY87 Gm36981-201ENSMUST00000192340 4485 ntBASIC9.25□□□□□ -0.93
Usp47Q8BY87 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Usp47Q8BY87 Gm24272-201ENSMUST00000102329 98 ntBASIC9.25□□□□□ -0.93
Usp47Q8BY87 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Usp47Q8BY87 Gm23485-201ENSMUST00000104181 155 ntBASIC9.25□□□□□ -0.93
Usp47Q8BY87 Gm11462-201ENSMUST00000117749 562 ntBASIC9.25□□□□□ -0.93
Usp47Q8BY87 Gm8692-201ENSMUST00000118102 438 ntBASIC9.25□□□□□ -0.93
Usp47Q8BY87 Gm14018-201ENSMUST00000119042 455 ntBASIC9.25□□□□□ -0.93
Usp47Q8BY87 Gm4911-201ENSMUST00000119388 945 ntBASIC9.25□□□□□ -0.93
Usp47Q8BY87 Rps29-ps-201ENSMUST00000122083 172 ntBASIC9.25□□□□□ -0.93
Usp47Q8BY87 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Usp47Q8BY87 Gm7663-201ENSMUST00000201151 1240 ntBASIC9.25□□□□□ -0.93
Usp47Q8BY87 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC9.25□□□□□ -0.93
Usp47Q8BY87 Gm5055-201ENSMUST00000215697 581 ntBASIC9.25□□□□□ -0.93
Usp47Q8BY87 AC137902.1-201ENSMUST00000228184 102 ntBASIC9.25□□□□□ -0.93
Usp47Q8BY87 Gm9788-201ENSMUST00000057038 906 ntBASIC9.25□□□□□ -0.93
Usp47Q8BY87 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Usp47Q8BY87 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Usp47Q8BY87 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Usp47Q8BY87 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Usp47Q8BY87 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Usp47Q8BY87 Gm45457-201ENSMUST00000209931 3089 ntBASIC9.25□□□□□ -0.93
Usp47Q8BY87 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Usp47Q8BY87 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Usp47Q8BY87 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Usp47Q8BY87 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
Usp47Q8BY87 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Usp47Q8BY87 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Usp47Q8BY87 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm13604-201ENSMUST00000119332 482 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm14900-201ENSMUST00000120304 733 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm23164-201ENSMUST00000175084 111 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 n-R5s209-201ENSMUST00000179494 119 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm27348-201ENSMUST00000184511 170 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 AC154563.1-201ENSMUST00000228317 442 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm45290-201ENSMUST00000211177 3890 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Usp47Q8BY87 AC155710.1-201ENSMUST00000219913 1353 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm43169-201ENSMUST00000199544 4734 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm4073-201ENSMUST00000176792 3500 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Usp47Q8BY87 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm42685-201ENSMUST00000200378 2390 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm11256-201ENSMUST00000118109 829 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm5125-201ENSMUST00000148614 624 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Gm23903-201ENSMUST00000157566 131 ntBASIC9.24□□□□□ -0.93
Usp47Q8BY87 Cfhr3-201ENSMUST00000170441 1022 ntBASIC9.24□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 111.7 ms