Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Gm11653-201ENSMUST00000119992 1009 ntBASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Gm13237-201ENSMUST00000122151 635 ntBASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Gm25116-201ENSMUST00000157191 122 ntBASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Gm16113-201ENSMUST00000159629 372 ntBASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Gm27178-201ENSMUST00000184962 340 ntBASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Ccdc40Q8BI79 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Olfr771-202ENSMUST00000214271 2098 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Gm12677-201ENSMUST00000118668 426 ntBASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Gm22025-201ENSMUST00000122734 302 ntBASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Gm25717-201ENSMUST00000158631 353 ntBASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Gm6726-201ENSMUST00000172786 681 ntBASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Mir6972-201ENSMUST00000184774 64 ntBASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Gm3841-201ENSMUST00000191399 451 ntBASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Gm37383-201ENSMUST00000191750 745 ntBASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Gm45733-201ENSMUST00000212988 437 ntBASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 AC154368.2-201ENSMUST00000222334 1724 ntBASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Mir296-201ENSMUST00000083587 79 ntBASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Ccdc40Q8BI79 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Ccdc40Q8BI79 Gm14988-201ENSMUST00000117224 1548 ntBASIC6.96□□□□□ -1.29
Ccdc40Q8BI79 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.29
Ccdc40Q8BI79 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Ccdc40Q8BI79 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Ccdc40Q8BI79 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gm37703-201ENSMUST00000192292 1784 ntBASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gm24519-201ENSMUST00000104507 132 ntBASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gm12985-201ENSMUST00000118376 183 ntBASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gm12242-201ENSMUST00000118824 738 ntBASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gm13744-201ENSMUST00000118953 850 ntBASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gm11726-201ENSMUST00000121028 424 ntBASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gm15586-201ENSMUST00000121218 528 ntBASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gm15242-201ENSMUST00000122459 283 ntBASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Ccdc40Q8BI79 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms