Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Shank3Q4ACU6 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC8.14□□□□□ -1.11
Shank3Q4ACU6 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC8.14□□□□□ -1.11
Shank3Q4ACU6 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Gm38124-201ENSMUST00000191710 2581 ntBASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Dusp3-203ENSMUST00000107173 4311 ntTSL 2 BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Gm28467-201ENSMUST00000190981 318 ntBASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Gm20926-201ENSMUST00000194457 696 ntBASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Gm18781-201ENSMUST00000211252 924 ntBASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Gm45874-201ENSMUST00000212423 346 ntBASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 AC161586.1-201ENSMUST00000223232 547 ntBASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Olfr1410-202ENSMUST00000216553 5433 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Dusp3-201ENSMUST00000003612 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Gm38142-201ENSMUST00000194093 3555 ntBASIC8.13□□□□□ -1.11
Shank3Q4ACU6 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC8.13□□□□□ -1.11
Shank3Q4ACU6 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Syt11-201ENSMUST00000090945 4567 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Shank3Q4ACU6 CT025642.2-201ENSMUST00000225009 1649 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm14521-201ENSMUST00000119545 350 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm23250-201ENSMUST00000157444 267 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm23031-201ENSMUST00000157998 119 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm3008-201ENSMUST00000160566 571 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm2058-201ENSMUST00000178791 560 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm24957-201ENSMUST00000179604 132 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm28080-201ENSMUST00000188552 722 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm18348-201ENSMUST00000191227 820 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm44251-201ENSMUST00000204963 442 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 CT030238.4-203ENSMUST00000227343 836 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Umodl1-202ENSMUST00000066981 4662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm8534-201ENSMUST00000118553 766 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm15040-201ENSMUST00000118561 1241 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm13998-201ENSMUST00000120952 335 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 n-R5s19-201ENSMUST00000122793 120 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm23408-201ENSMUST00000158523 265 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm26381-201ENSMUST00000174895 92 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm3148-201ENSMUST00000203594 612 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm5373-201ENSMUST00000212113 1050 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Defb2-201ENSMUST00000006745 305 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 n-R5s56-201ENSMUST00000082521 105 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm24200-201ENSMUST00000082955 157 ntBASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Shank3Q4ACU6 Unc5c-204ENSMUST00000130636 3595 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Shank3Q4ACU6 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Shank3Q4ACU6 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shank3Q4ACU6 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shank3Q4ACU6 Adgrl3-216ENSMUST00000121641 5151 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Shank3Q4ACU6 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC8.11□□□□□ -1.11
Shank3Q4ACU6 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Shank3Q4ACU6 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Shank3Q4ACU6 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
Shank3Q4ACU6 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Shank3Q4ACU6 Thrb-202ENSMUST00000022304 6200 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms