Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Gm24143-201ENSMUST00000082633 145 ntBASIC6.97□□□□□ -1.29
Msx2Q03358 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Msx2Q03358 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Msx2Q03358 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.97□□□□□ -1.29
Msx2Q03358 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
Msx2Q03358 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC6.97□□□□□ -1.29
Msx2Q03358 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Msx2Q03358 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Msx2Q03358 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Msx2Q03358 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Msx2Q03358 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Msx2Q03358 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Msx2Q03358 AC154747.4-203ENSMUST00000225893 1384 ntBASIC6.96□□□□□ -1.29
Msx2Q03358 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Msx2Q03358 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Msx2Q03358 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Msx2Q03358 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Msx2Q03358 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Msx2Q03358 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC6.96□□□□□ -1.29
Msx2Q03358 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
Msx2Q03358 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC6.96□□□□□ -1.3
Msx2Q03358 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Msx2Q03358 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Msx2Q03358 Gm22271-201ENSMUST00000104035 128 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm24374-201ENSMUST00000104394 106 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm24071-201ENSMUST00000104520 132 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm16056-201ENSMUST00000119293 135 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm11809-201ENSMUST00000120923 950 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm15096-201ENSMUST00000121918 878 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Msx2Q03358 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC6.96□□□□□ -1.3
Msx2Q03358 Gm25721-201ENSMUST00000157496 171 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm3102-201ENSMUST00000164236 489 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm17064-201ENSMUST00000167690 452 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC6.96□□□□□ -1.3
Msx2Q03358 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Mir3060-201ENSMUST00000175339 83 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Msx2Q03358 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
Msx2Q03358 Gm28281-201ENSMUST00000185658 187 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm5147-201ENSMUST00000185999 794 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm28594-201ENSMUST00000187022 661 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Msx2Q03358 Gm8870-201ENSMUST00000188170 775 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm28401-202ENSMUST00000190769 550 ntTSL 5 BASIC6.96□□□□□ -1.3
Msx2Q03358 Gm37322-201ENSMUST00000193409 337 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm17965-201ENSMUST00000193904 517 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm43848-201ENSMUST00000198060 1247 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Msx2Q03358 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Msx2Q03358 Gm44285-201ENSMUST00000203557 940 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm7424-201ENSMUST00000206919 902 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Nxpe1-ps-202ENSMUST00000210160 956 ntTSL 5 BASIC6.96□□□□□ -1.3
Msx2Q03358 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Msx2Q03358 Gm20946-201ENSMUST00000212367 461 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Gm35454-202ENSMUST00000214817 1101 ntTSL 5 BASIC6.96□□□□□ -1.3
Msx2Q03358 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC6.96□□□□□ -1.3
Msx2Q03358 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.96□□□□□ -1.3
Msx2Q03358 AC160931.1-201ENSMUST00000223298 413 ntTSL 3 BASIC6.96□□□□□ -1.3
Msx2Q03358 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 AC154649.2-201ENSMUST00000228189 808 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC6.96□□□□□ -1.3
Msx2Q03358 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC6.96□□□□□ -1.3
Msx2Q03358 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Msx2Q03358 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Msx2Q03358 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Msx2Q03358 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Msx2Q03358 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Msx2Q03358 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Msx2Q03358 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Msx2Q03358 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.96□□□□□ -1.3
Msx2Q03358 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Msx2Q03358 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Msx2Q03358 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Msx2Q03358 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC6.96□□□□□ -1.3
Msx2Q03358 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Msx2Q03358 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msx2Q03358 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Msx2Q03358 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.95□□□□□ -1.3
Msx2Q03358 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.95□□□□□ -1.3
Msx2Q03358 Gm43258-201ENSMUST00000200312 1950 ntBASIC6.95□□□□□ -1.3
Msx2Q03358 Gm44704-201ENSMUST00000208963 1990 ntBASIC6.95□□□□□ -1.3
Msx2Q03358 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Msx2Q03358 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Msx2Q03358 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Msx2Q03358 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Msx2Q03358 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
Msx2Q03358 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.95□□□□□ -1.3
Msx2Q03358 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC6.95□□□□□ -1.3
Msx2Q03358 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Msx2Q03358 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Msx2Q03358 Gm23358-201ENSMUST00000103887 110 ntBASIC6.95□□□□□ -1.3
Msx2Q03358 Gm22661-201ENSMUST00000104192 132 ntBASIC6.95□□□□□ -1.3
Msx2Q03358 Gm22022-201ENSMUST00000104355 127 ntBASIC6.95□□□□□ -1.3
Msx2Q03358 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.95□□□□□ -1.3
Msx2Q03358 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Msx2Q03358 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms