Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gm37496-201ENSMUST00000191930 2509 ntBASIC6.27□□□□□ -1.41
Col8a1Q00780 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC6.27□□□□□ -1.41
Col8a1Q00780 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col8a1Q00780 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm6327-201ENSMUST00000171185 1335 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm44777-201ENSMUST00000205941 4052 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm37499-201ENSMUST00000194683 3478 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Rbms3-212ENSMUST00000174868 2164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm9144-201ENSMUST00000101625 1008 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm12468-201ENSMUST00000116189 404 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm11406-201ENSMUST00000117418 484 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm13798-201ENSMUST00000118285 139 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm11445-201ENSMUST00000119101 532 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm6987-201ENSMUST00000119319 428 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm7189-201ENSMUST00000119811 429 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm4773-201ENSMUST00000120392 702 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm12890-201ENSMUST00000120885 373 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm14623-201ENSMUST00000121398 603 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm12321-201ENSMUST00000121485 804 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm14847-201ENSMUST00000121978 519 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm11895-201ENSMUST00000122165 467 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm13218-201ENSMUST00000128180 265 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm7613-201ENSMUST00000139070 487 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Mir1953-201ENSMUST00000157866 89 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Mir1930-201ENSMUST00000158799 84 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Mir8094-201ENSMUST00000183361 117 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Mir6971-201ENSMUST00000183497 63 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm38061-201ENSMUST00000192490 365 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm7019-201ENSMUST00000194122 369 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Col8a1Q00780 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 AC133948.2-201ENSMUST00000217850 378 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 AC132384.13-201ENSMUST00000219556 1159 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm3800-201ENSMUST00000221086 554 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm45965-201ENSMUST00000221192 1284 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 AC158523.2-201ENSMUST00000222708 548 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 CT030182.4-201ENSMUST00000223647 645 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 AC069562.1-201ENSMUST00000224206 434 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC6.26□□□□□ -1.41
Col8a1Q00780 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Gm42679-201ENSMUST00000197086 2906 ntBASIC6.26□□□□□ -1.41
Col8a1Q00780 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a1Q00780 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms