Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Sox1P53783 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Sox1P53783 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
Sox1P53783 Fmo5-202ENSMUST00000107049 2583 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Sox1P53783 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC7.6□□□□□ -1.19
Sox1P53783 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Sox1P53783 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC7.59□□□□□ -1.19
Sox1P53783 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC7.59□□□□□ -1.19
Sox1P53783 Ube4bos1-201ENSMUST00000141259 2227 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 AC125020.1-201ENSMUST00000220137 2225 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Sox1P53783 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC7.59□□□□□ -1.19
Sox1P53783 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC7.59□□□□□ -1.19
Sox1P53783 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Sox1P53783 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
Sox1P53783 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Gm24272-201ENSMUST00000102329 98 ntBASIC7.59□□□□□ -1.19
Sox1P53783 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Gm24519-201ENSMUST00000104507 132 ntBASIC7.59□□□□□ -1.19
Sox1P53783 Gm11649-201ENSMUST00000118214 375 ntBASIC7.59□□□□□ -1.19
Sox1P53783 Gm12540-201ENSMUST00000121938 319 ntBASIC7.59□□□□□ -1.19
Sox1P53783 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC7.59□□□□□ -1.19
Sox1P53783 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC7.59□□□□□ -1.19
Sox1P53783 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC7.59□□□□□ -1.19
Sox1P53783 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Gm2930-201ENSMUST00000170403 474 ntBASIC7.59□□□□□ -1.19
Sox1P53783 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC7.59□□□□□ -1.19
Sox1P53783 Gm18396-201ENSMUST00000177095 361 ntBASIC7.59□□□□□ -1.19
Sox1P53783 Gm28527-201ENSMUST00000185210 297 ntBASIC7.59□□□□□ -1.19
Sox1P53783 Gm5261-201ENSMUST00000185860 713 ntBASIC7.59□□□□□ -1.19
Sox1P53783 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC7.59□□□□□ -1.19
Sox1P53783 Gm10416-201ENSMUST00000197379 645 ntBASIC7.59□□□□□ -1.19
Sox1P53783 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC7.59□□□□□ -1.19
Sox1P53783 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Gm8035-201ENSMUST00000204625 687 ntBASIC7.59□□□□□ -1.19
Sox1P53783 Gm44919-201ENSMUST00000208587 1073 ntBASIC7.59□□□□□ -1.19
Sox1P53783 Gm4042-201ENSMUST00000216946 637 ntBASIC7.59□□□□□ -1.19
Sox1P53783 AC126275.1-201ENSMUST00000224881 446 ntBASIC7.59□□□□□ -1.19
Sox1P53783 AC121960.3-201ENSMUST00000227077 623 ntBASIC7.59□□□□□ -1.19
Sox1P53783 AC137902.2-201ENSMUST00000227989 576 ntBASIC7.59□□□□□ -1.19
Sox1P53783 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC7.59□□□□□ -1.19
Sox1P53783 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Sox1P53783 Olfr519-201ENSMUST00000084752 960 ntBASIC7.59□□□□□ -1.19
Sox1P53783 Mir463-201ENSMUST00000093570 75 ntBASIC7.59□□□□□ -1.19
Sox1P53783 Gm35572-201ENSMUST00000212427 2310 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC7.59□□□□□ -1.19
Sox1P53783 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Gm15681-201ENSMUST00000137501 2704 ntBASIC7.59□□□□□ -1.19
Sox1P53783 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 AC163342.1-201ENSMUST00000216533 2718 ntTSL 5 BASIC7.59□□□□□ -1.19
Sox1P53783 Rtl3-201ENSMUST00000062010 2948 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC7.59□□□□□ -1.19
Sox1P53783 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Gm43544-201ENSMUST00000196474 2472 ntBASIC7.59□□□□□ -1.19
Sox1P53783 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Sox1P53783 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC7.59□□□□□ -1.19
Sox1P53783 Nedd4l-204ENSMUST00000224347 3150 ntBASIC7.59□□□□□ -1.2
Sox1P53783 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Sox1P53783 Gm40309-201ENSMUST00000202699 1752 ntBASIC7.59□□□□□ -1.2
Sox1P53783 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC7.58□□□□□ -1.2
Sox1P53783 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 AC061963.2-201ENSMUST00000213541 2739 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Sox1P53783 Il1rl1-203ENSMUST00000173514 2661 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Cep95-201ENSMUST00000018516 2696 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Slc13a2os-201ENSMUST00000149865 3627 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 1700074P13Rik-202ENSMUST00000122181 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Gm7205-201ENSMUST00000196032 1323 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Sox1P53783 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Gm38099-201ENSMUST00000193280 3170 ntBASIC7.58□□□□□ -1.2
Sox1P53783 Mapk6-201ENSMUST00000049355 4072 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Tnfsf15-201ENSMUST00000062246 3347 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Sox1P53783 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC7.58□□□□□ -1.2
Sox1P53783 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC7.58□□□□□ -1.2
Sox1P53783 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC7.58□□□□□ -1.2
Sox1P53783 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms