Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Brca1P48754 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC7.42□□□□□ -1.22
Brca1P48754 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Brca1P48754 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Brca1P48754 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
Brca1P48754 Gm14870-201ENSMUST00000118414 156 ntBASIC7.42□□□□□ -1.22
Brca1P48754 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC7.42□□□□□ -1.22
Brca1P48754 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Brca1P48754 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Brca1P48754 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC7.42□□□□□ -1.22
Brca1P48754 Mir6903-201ENSMUST00000183597 88 ntBASIC7.42□□□□□ -1.22
Brca1P48754 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC7.42□□□□□ -1.22
Brca1P48754 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Brca1P48754 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Brca1P48754 Gm17918-201ENSMUST00000205315 574 ntBASIC7.42□□□□□ -1.22
Brca1P48754 AC112956.1-201ENSMUST00000213563 492 ntBASIC7.42□□□□□ -1.22
Brca1P48754 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Brca1P48754 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Brca1P48754 Sh2d4b-201ENSMUST00000070328 3086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Brca1P48754 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
Brca1P48754 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
Brca1P48754 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Brca1P48754 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC7.41□□□□□ -1.22
Brca1P48754 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC7.41□□□□□ -1.22
Brca1P48754 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brca1P48754 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Brca1P48754 Gm15016-201ENSMUST00000117300 720 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Gm4789-201ENSMUST00000121708 1216 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC7.41□□□□□ -1.22
Brca1P48754 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Brca1P48754 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brca1P48754 Gm22724-201ENSMUST00000158091 127 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Ighv5-19-201ENSMUST00000193466 297 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Ighv5-3-201ENSMUST00000195336 322 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Gm29813-201ENSMUST00000195856 447 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Gm43724-201ENSMUST00000197516 226 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC7.41□□□□□ -1.22
Brca1P48754 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC7.41□□□□□ -1.22
Brca1P48754 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC7.41□□□□□ -1.22
Brca1P48754 Gm45750-201ENSMUST00000211966 354 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Brca1P48754 Gm7570-201ENSMUST00000215246 698 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Gm5080-201ENSMUST00000220341 743 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brca1P48754 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC7.41□□□□□ -1.22
Brca1P48754 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brca1P48754 4932411K12Rik-203ENSMUST00000210384 1351 ntTSL 5 BASIC7.41□□□□□ -1.22
Brca1P48754 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC7.41□□□□□ -1.22
Brca1P48754 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brca1P48754 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brca1P48754 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Brca1P48754 AC151904.1-201ENSMUST00000219945 1498 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Brca1P48754 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brca1P48754 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brca1P48754 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
Brca1P48754 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Brca1P48754 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Brca1P48754 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brca1P48754 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Brca1P48754 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Brca1P48754 Olfr15-203ENSMUST00000214590 6240 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Brca1P48754 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brca1P48754 AC135119.1-202ENSMUST00000228435 2203 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brca1P48754 Gm3008-201ENSMUST00000160566 571 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Gm19840-201ENSMUST00000169624 882 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Gm28934-201ENSMUST00000186491 346 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Gm37376-201ENSMUST00000192176 453 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Gm6631-201ENSMUST00000193699 559 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Gm42437-201ENSMUST00000197263 923 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Gm42652-201ENSMUST00000199073 614 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Gm36501-201ENSMUST00000221857 745 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Brca1P48754 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC7.41□□□□□ -1.22
Brca1P48754 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Brca1P48754 Mir134-201ENSMUST00000083492 71 ntBASIC7.41□□□□□ -1.22
Brca1P48754 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Brca1P48754 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Brca1P48754 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Brca1P48754 Gm38178-201ENSMUST00000194502 2471 ntBASIC7.4□□□□□ -1.22
Brca1P48754 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.22
Brca1P48754 Cep295-203ENSMUST00000098979 7188 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
Brca1P48754 Gm44898-201ENSMUST00000205934 2223 ntBASIC7.4□□□□□ -1.22
Brca1P48754 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.4□□□□□ -1.22
Brca1P48754 Heatr5b-201ENSMUST00000097281 6437 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Brca1P48754 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms