Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Rpl28P41105 Gm37163-201ENSMUST00000195439 1690 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Rpl28P41105 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Rpl28P41105 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 AC122769.1-201ENSMUST00000226930 1714 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm36947-201ENSMUST00000194709 2249 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Ube4a-202ENSMUST00000117549 3415 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm37076-201ENSMUST00000192033 2294 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Gm43190-201ENSMUST00000187850 1779 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Ighv1-63-201ENSMUST00000103534 351 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Rpl28P41105 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Rpl28P41105 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm25760-201ENSMUST00000103989 132 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Gm24473-201ENSMUST00000104483 131 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm12331-201ENSMUST00000119927 622 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC4.41□□□□□ -1.7
Rpl28P41105 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm24647-201ENSMUST00000157112 113 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Gm22035-201ENSMUST00000157284 228 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Gm7244-201ENSMUST00000164658 455 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Gm6918-201ENSMUST00000167622 1222 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm26595-201ENSMUST00000181585 484 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Gm5300-201ENSMUST00000182201 1003 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC4.41□□□□□ -1.7
Rpl28P41105 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm6472-202ENSMUST00000187973 582 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Gm29160-201ENSMUST00000190094 699 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm38373-201ENSMUST00000192042 288 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm19185-201ENSMUST00000196365 643 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Gm30517-201ENSMUST00000197350 772 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Gm42804-201ENSMUST00000199701 178 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm44979-201ENSMUST00000206218 287 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Gm44722-201ENSMUST00000206473 436 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC4.41□□□□□ -1.7
Rpl28P41105 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC4.41□□□□□ -1.7
Rpl28P41105 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Rpl28P41105 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC4.41□□□□□ -1.7
Rpl28P41105 RMST_1.1-203ENSMUST00000217866 775 ntTSL 3 BASIC4.41□□□□□ -1.7
Rpl28P41105 AC116502.1-201ENSMUST00000220989 291 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 AV026068-219ENSMUST00000224148 933 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 AC161877.2-201ENSMUST00000226248 545 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 CT009556.4-201ENSMUST00000227092 200 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Rpl28P41105 Olfr1360-201ENSMUST00000079135 980 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Rpl28P41105 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Rpl28P41105 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC4.41□□□□□ -1.7
Rpl28P41105 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm38248-201ENSMUST00000193744 5783 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Rpl28P41105 AC160029.1-201ENSMUST00000219628 2678 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC4.41□□□□□ -1.7
Rpl28P41105 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Gm42930-201ENSMUST00000200872 3260 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm18757-201ENSMUST00000207938 3141 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC4.41□□□□□ -1.7
Rpl28P41105 AC153144.1-201ENSMUST00000221759 3139 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm43363-201ENSMUST00000201590 2647 ntBASIC4.41□□□□□ -1.7
Rpl28P41105 Tcf7l2-202ENSMUST00000061496 4053 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
Rpl28P41105 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Rpl28P41105 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC4.4□□□□□ -1.7
Rpl28P41105 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Rpl28P41105 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Rpl28P41105 CT025675.1-201ENSMUST00000228171 1567 ntBASIC4.4□□□□□ -1.7
Rpl28P41105 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Rpl28P41105 Gm4994-201ENSMUST00000118379 2187 ntBASIC4.4□□□□□ -1.7
Rpl28P41105 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Rpl28P41105 Gm45360-201ENSMUST00000210698 1405 ntBASIC4.4□□□□□ -1.7
Rpl28P41105 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Rpl28P41105 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Rpl28P41105 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
Rpl28P41105 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
Rpl28P41105 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms