Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm20128-201ENSMUST00000196189 417 ntBASIC7.83□□□□□ -1.16
Pde6aP27664 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Pde6aP27664 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC7.83□□□□□ -1.16
Pde6aP27664 Gm19764-201ENSMUST00000203630 649 ntBASIC7.83□□□□□ -1.16
Pde6aP27664 Gm44213-201ENSMUST00000204977 703 ntBASIC7.83□□□□□ -1.16
Pde6aP27664 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC7.83□□□□□ -1.16
Pde6aP27664 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC7.83□□□□□ -1.16
Pde6aP27664 Gm3213-201ENSMUST00000219296 441 ntBASIC7.83□□□□□ -1.16
Pde6aP27664 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Pde6aP27664 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC7.83□□□□□ -1.16
Pde6aP27664 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.83□□□□□ -1.16
Pde6aP27664 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Pde6aP27664 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Pde6aP27664 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Pde6aP27664 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Pde6aP27664 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC7.83□□□□□ -1.16
Pde6aP27664 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Pde6aP27664 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Pde6aP27664 AC139350.2-201ENSMUST00000226508 2331 ntBASIC7.83□□□□□ -1.16
Pde6aP27664 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Pde6aP27664 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Pde6aP27664 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Pde6aP27664 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.82□□□□□ -1.16
Pde6aP27664 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Pde6aP27664 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Pde6aP27664 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pde6aP27664 Gm43341-201ENSMUST00000200104 1308 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.82□□□□□ -1.16
Pde6aP27664 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pde6aP27664 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pde6aP27664 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pde6aP27664 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pde6aP27664 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Pde6aP27664 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Pde6aP27664 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.82□□□□□ -1.16
Pde6aP27664 Gm12135-201ENSMUST00000119170 466 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Gm6987-201ENSMUST00000119319 428 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC7.82□□□□□ -1.16
Pde6aP27664 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC7.82□□□□□ -1.16
Pde6aP27664 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Pde6aP27664 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC7.82□□□□□ -1.16
Pde6aP27664 Gm24781-201ENSMUST00000157636 117 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Pde6aP27664 Gm22990-201ENSMUST00000175427 89 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Pde6aP27664 Gm10136-201ENSMUST00000183196 435 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC7.82□□□□□ -1.16
Pde6aP27664 Gm27186-201ENSMUST00000184223 307 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Gm27804-201ENSMUST00000185135 119 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC7.82□□□□□ -1.16
Pde6aP27664 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC7.82□□□□□ -1.16
Pde6aP27664 Gm37709-201ENSMUST00000195074 600 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Igkv4-83-201ENSMUST00000196933 334 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Gm43203-201ENSMUST00000200130 558 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.82□□□□□ -1.16
Pde6aP27664 Gm43867-201ENSMUST00000203860 525 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.82□□□□□ -1.16
Pde6aP27664 Gm18899-201ENSMUST00000217663 546 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC7.82□□□□□ -1.16
Pde6aP27664 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC7.82□□□□□ -1.16
Pde6aP27664 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 AC123917.1-201ENSMUST00000228063 1048 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Pde6aP27664 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Pde6aP27664 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Pde6aP27664 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pde6aP27664 Mir484-201ENSMUST00000093566 67 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pde6aP27664 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Pde6aP27664 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC7.82□□□□□ -1.16
Pde6aP27664 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC7.82□□□□□ -1.16
Pde6aP27664 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pde6aP27664 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pde6aP27664 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Pde6aP27664 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Pde6aP27664 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.82□□□□□ -1.16
Pde6aP27664 Gm9226-201ENSMUST00000188352 3489 ntBASIC7.82□□□□□ -1.16
Pde6aP27664 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pde6aP27664 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC7.81□□□□□ -1.16
Pde6aP27664 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pde6aP27664 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pde6aP27664 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Pde6aP27664 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Pde6aP27664 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Pde6aP27664 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Pde6aP27664 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC7.81□□□□□ -1.16
Pde6aP27664 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pde6aP27664 Gm20121-201ENSMUST00000198547 1594 ntBASIC7.81□□□□□ -1.16
Pde6aP27664 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pde6aP27664 Gm20541-201ENSMUST00000173035 1406 ntBASIC7.81□□□□□ -1.16
Pde6aP27664 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pde6aP27664 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pde6aP27664 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Pde6aP27664 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Pde6aP27664 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms