Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Col1a1P11087 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col1a1P11087 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
Col1a1P11087 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Col1a1P11087 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col1a1P11087 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col1a1P11087 Gm37790-201ENSMUST00000193136 3346 ntBASIC7.73□□□□□ -1.17
Col1a1P11087 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
Col1a1P11087 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC7.73□□□□□ -1.17
Col1a1P11087 Gm22599-201ENSMUST00000157597 132 ntBASIC7.73□□□□□ -1.17
Col1a1P11087 Gm23259-201ENSMUST00000158318 303 ntBASIC7.73□□□□□ -1.17
Col1a1P11087 Gm25363-201ENSMUST00000158850 245 ntBASIC7.73□□□□□ -1.17
Col1a1P11087 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC7.73□□□□□ -1.17
Col1a1P11087 Gm37203-201ENSMUST00000191618 385 ntBASIC7.73□□□□□ -1.17
Col1a1P11087 Gm37375-201ENSMUST00000193859 387 ntBASIC7.73□□□□□ -1.17
Col1a1P11087 Gm37385-201ENSMUST00000195223 387 ntBASIC7.73□□□□□ -1.17
Col1a1P11087 Gm36448-201ENSMUST00000199916 438 ntBASIC7.73□□□□□ -1.17
Col1a1P11087 Gm43798-201ENSMUST00000202056 394 ntBASIC7.73□□□□□ -1.17
Col1a1P11087 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.73□□□□□ -1.17
Col1a1P11087 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col1a1P11087 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC7.73□□□□□ -1.17
Col1a1P11087 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC7.73□□□□□ -1.17
Col1a1P11087 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.73□□□□□ -1.17
Col1a1P11087 Gm42636-201ENSMUST00000197174 2239 ntBASIC7.73□□□□□ -1.17
Col1a1P11087 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col1a1P11087 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col1a1P11087 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col1a1P11087 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC7.73□□□□□ -1.17
Col1a1P11087 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC7.73□□□□□ -1.17
Col1a1P11087 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC7.73□□□□□ -1.17
Col1a1P11087 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC7.73□□□□□ -1.17
Col1a1P11087 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC7.73□□□□□ -1.17
Col1a1P11087 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col1a1P11087 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Gm43169-201ENSMUST00000199544 4734 ntBASIC7.72□□□□□ -1.17
Col1a1P11087 Gm43719-201ENSMUST00000200088 2199 ntBASIC7.72□□□□□ -1.17
Col1a1P11087 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
Col1a1P11087 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Gm22372-201ENSMUST00000104589 136 ntBASIC7.72□□□□□ -1.17
Col1a1P11087 Gm13641-201ENSMUST00000117993 473 ntBASIC7.72□□□□□ -1.17
Col1a1P11087 Gm11622-201ENSMUST00000120525 691 ntBASIC7.72□□□□□ -1.17
Col1a1P11087 Mup-ps28-201ENSMUST00000120686 289 ntBASIC7.72□□□□□ -1.17
Col1a1P11087 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC7.72□□□□□ -1.17
Col1a1P11087 Gm23995-201ENSMUST00000158060 129 ntBASIC7.72□□□□□ -1.17
Col1a1P11087 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Col1a1P11087 Gm8860-201ENSMUST00000193160 445 ntBASIC7.72□□□□□ -1.17
Col1a1P11087 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Gm4332-201ENSMUST00000196114 346 ntBASIC7.72□□□□□ -1.17
Col1a1P11087 AC140409.4-201ENSMUST00000215757 538 ntBASIC7.72□□□□□ -1.17
Col1a1P11087 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC7.72□□□□□ -1.17
Col1a1P11087 AC170086.2-201ENSMUST00000224733 803 ntBASIC7.72□□□□□ -1.17
Col1a1P11087 AC116591.1-201ENSMUST00000227919 351 ntBASIC7.72□□□□□ -1.17
Col1a1P11087 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
Col1a1P11087 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Col1a1P11087 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Col1a1P11087 Als2cr12-203ENSMUST00000188772 1382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
Col1a1P11087 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Col1a1P11087 Nt5dc1-203ENSMUST00000105512 2727 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Col1a1P11087 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC7.72□□□□□ -1.17
Col1a1P11087 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Col1a1P11087 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Col1a1P11087 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Col1a1P11087 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
Col1a1P11087 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.71□□□□□ -1.17
Col1a1P11087 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Col1a1P11087 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC7.71□□□□□ -1.17
Col1a1P11087 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Col1a1P11087 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC7.71□□□□□ -1.17
Col1a1P11087 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Col1a1P11087 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC7.71□□□□□ -1.18
Col1a1P11087 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col1a1P11087 Gm13428-201ENSMUST00000117540 365 ntBASIC7.71□□□□□ -1.18
Col1a1P11087 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Col1a1P11087 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC7.71□□□□□ -1.18
Col1a1P11087 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC7.71□□□□□ -1.18
Col1a1P11087 Gm9529-201ENSMUST00000177598 579 ntBASIC7.71□□□□□ -1.18
Col1a1P11087 Gm5947-201ENSMUST00000179156 714 ntBASIC7.71□□□□□ -1.18
Col1a1P11087 Gm5645-201ENSMUST00000179597 714 ntBASIC7.71□□□□□ -1.18
Col1a1P11087 Gm7745-201ENSMUST00000182235 973 ntBASIC7.71□□□□□ -1.18
Col1a1P11087 Ighv5-3-201ENSMUST00000195336 322 ntBASIC7.71□□□□□ -1.18
Col1a1P11087 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
Col1a1P11087 Mir298-201ENSMUST00000083476 82 ntBASIC7.71□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms