Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm27970-201ENSMUST00000184854 407 ntBASIC8.54□□□□□ -1.04
Hoxc9P09633 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hoxc9P09633 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC8.54□□□□□ -1.04
Hoxc9P09633 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hoxc9P09633 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hoxc9P09633 Gm21728-201ENSMUST00000188442 695 ntBASIC8.54□□□□□ -1.04
Hoxc9P09633 Gm21889-201ENSMUST00000188487 695 ntBASIC8.54□□□□□ -1.04
Hoxc9P09633 Gm20932-201ENSMUST00000189115 694 ntBASIC8.54□□□□□ -1.04
Hoxc9P09633 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Hoxc9P09633 Gm21920-201ENSMUST00000190042 695 ntBASIC8.54□□□□□ -1.04
Hoxc9P09633 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hoxc9P09633 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hoxc9P09633 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Hoxc9P09633 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Hoxc9P09633 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC8.54□□□□□ -1.04
Hoxc9P09633 Gm5080-201ENSMUST00000220341 743 ntBASIC8.54□□□□□ -1.04
Hoxc9P09633 AC119894.1-201ENSMUST00000220399 350 ntBASIC8.54□□□□□ -1.04
Hoxc9P09633 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC8.54□□□□□ -1.04
Hoxc9P09633 AC140288.1-201ENSMUST00000226329 503 ntBASIC8.54□□□□□ -1.04
Hoxc9P09633 Gm22126-201ENSMUST00000083244 142 ntBASIC8.54□□□□□ -1.04
Hoxc9P09633 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Hoxc9P09633 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Hoxc9P09633 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Hoxc9P09633 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hoxc9P09633 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Hoxc9P09633 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC8.54□□□□□ -1.04
Hoxc9P09633 Gm37234-201ENSMUST00000193259 1441 ntBASIC8.54□□□□□ -1.04
Hoxc9P09633 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Hoxc9P09633 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxc9P09633 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxc9P09633 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Hoxc9P09633 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxc9P09633 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm43421-201ENSMUST00000200044 2905 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm22103-201ENSMUST00000116733 121 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm26475-201ENSMUST00000116769 121 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm23620-201ENSMUST00000116812 121 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm25042-201ENSMUST00000116856 121 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm25540-201ENSMUST00000116880 121 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm12442-201ENSMUST00000118372 338 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm14300-201ENSMUST00000120800 946 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm23894-201ENSMUST00000158107 313 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm24179-201ENSMUST00000158925 127 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm18833-201ENSMUST00000173218 862 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm23550-201ENSMUST00000179003 121 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm25123-201ENSMUST00000179154 121 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm25353-201ENSMUST00000179366 121 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm22992-201ENSMUST00000179496 121 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm25892-201ENSMUST00000179867 121 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm24092-201ENSMUST00000180257 121 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm7343-201ENSMUST00000194510 1061 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm43160-201ENSMUST00000196453 421 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm2040-201ENSMUST00000202979 289 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm45127-201ENSMUST00000205984 1015 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm18467-201ENSMUST00000208805 434 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm9321-201ENSMUST00000221179 778 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 AC159979.1-201ENSMUST00000227927 342 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm5612-201ENSMUST00000053326 375 ntBASIC8.53□□□□□ -1.04
Hoxc9P09633 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxc9P09633 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxc9P09633 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxc9P09633 Nav1-201ENSMUST00000040599 12767 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Hoxc9P09633 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxc9P09633 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxc9P09633 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxc9P09633 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxc9P09633 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxc9P09633 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Hoxc9P09633 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
Hoxc9P09633 Gm43728-201ENSMUST00000198817 2622 ntBASIC8.52□□□□□ -1.04
Hoxc9P09633 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hoxc9P09633 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Hoxc9P09633 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Hoxc9P09633 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hoxc9P09633 Grik1-209ENSMUST00000227986 2942 ntBASIC8.52□□□□□ -1.05
Hoxc9P09633 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC8.52□□□□□ -1.05
Hoxc9P09633 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hoxc9P09633 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hoxc9P09633 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hoxc9P09633 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC8.52□□□□□ -1.05
Hoxc9P09633 Gm13626-201ENSMUST00000119435 402 ntBASIC8.52□□□□□ -1.05
Hoxc9P09633 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
Hoxc9P09633 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Hoxc9P09633 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC8.52□□□□□ -1.05
Hoxc9P09633 Gm20778-201ENSMUST00000178524 627 ntBASIC8.52□□□□□ -1.05
Hoxc9P09633 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Hoxc9P09633 Gm27030-201ENSMUST00000182551 464 ntBASIC8.52□□□□□ -1.05
Hoxc9P09633 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Hoxc9P09633 Gm6693-201ENSMUST00000189583 813 ntBASIC8.52□□□□□ -1.05
Hoxc9P09633 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC8.52□□□□□ -1.05
Hoxc9P09633 Gm43098-201ENSMUST00000199989 1297 ntBASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms