Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC5.94□□□□□ -1.46
P06344 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.94□□□□□ -1.46
P06344 AC154517.1-201ENSMUST00000222785 629 ntTSL 3 BASIC5.94□□□□□ -1.46
P06344 Gm6575-201ENSMUST00000222946 697 ntBASIC5.94□□□□□ -1.46
P06344 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC5.94□□□□□ -1.46
P06344 AC107663.1-201ENSMUST00000224257 468 ntBASIC5.94□□□□□ -1.46
P06344 AC123656.1-201ENSMUST00000227121 581 ntBASIC5.94□□□□□ -1.46
P06344 AC156016.2-201ENSMUST00000228200 525 ntBASIC5.94□□□□□ -1.46
P06344 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
P06344 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
P06344 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
P06344 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
P06344 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
P06344 Gm44661-201ENSMUST00000208830 3503 ntBASIC5.94□□□□□ -1.46
P06344 AC139350.2-201ENSMUST00000226508 2331 ntBASIC5.94□□□□□ -1.46
P06344 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
P06344 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
P06344 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
P06344 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
P06344 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
P06344 AC139750.1-201ENSMUST00000223962 1300 ntBASIC5.94□□□□□ -1.46
P06344 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
P06344 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC5.94□□□□□ -1.46
P06344 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC5.94□□□□□ -1.46
P06344 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
P06344 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
P06344 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
P06344 AC154642.2-201ENSMUST00000223657 2485 ntBASIC5.93□□□□□ -1.46
P06344 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
P06344 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
P06344 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
P06344 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
P06344 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
P06344 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
P06344 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC5.93□□□□□ -1.46
P06344 Gm23979-201ENSMUST00000104071 128 ntBASIC5.93□□□□□ -1.46
P06344 Gm25785-201ENSMUST00000104129 125 ntBASIC5.93□□□□□ -1.46
P06344 Gm24790-201ENSMUST00000104285 132 ntBASIC5.93□□□□□ -1.46
P06344 Gm15216-201ENSMUST00000118058 277 ntBASIC5.93□□□□□ -1.46
P06344 Gm11318-201ENSMUST00000118640 961 ntBASIC5.93□□□□□ -1.46
P06344 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC5.93□□□□□ -1.46
P06344 Gm15149-201ENSMUST00000119370 360 ntBASIC5.93□□□□□ -1.46
P06344 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
P06344 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
P06344 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
P06344 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
P06344 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
P06344 Gm8550-201ENSMUST00000161621 653 ntBASIC5.93□□□□□ -1.46
P06344 Gm20454-201ENSMUST00000172713 221 ntBASIC5.93□□□□□ -1.46
P06344 Gm3585-201ENSMUST00000173438 875 ntBASIC5.93□□□□□ -1.46
P06344 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC5.93□□□□□ -1.46
P06344 Gm25025-201ENSMUST00000175018 111 ntBASIC5.93□□□□□ -1.46
P06344 Gm20713-201ENSMUST00000176344 435 ntTSL 5 BASIC5.93□□□□□ -1.46
P06344 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
P06344 Gm27295-201ENSMUST00000184264 153 ntBASIC5.93□□□□□ -1.46
P06344 Gm28620-201ENSMUST00000190463 439 ntBASIC5.93□□□□□ -1.46
P06344 Gm42708-201ENSMUST00000196332 905 ntBASIC5.93□□□□□ -1.46
P06344 Gm5717-201ENSMUST00000198243 1062 ntBASIC5.93□□□□□ -1.46
P06344 Gm8190-201ENSMUST00000199603 586 ntBASIC5.93□□□□□ -1.46
P06344 Gm44911-201ENSMUST00000208436 1062 ntBASIC5.93□□□□□ -1.46
P06344 Gm32983-201ENSMUST00000208500 505 ntBASIC5.93□□□□□ -1.46
P06344 Gm45626-201ENSMUST00000210093 361 ntBASIC5.93□□□□□ -1.46
P06344 Gm5928-201ENSMUST00000221839 466 ntBASIC5.93□□□□□ -1.46
P06344 AC091783.3-201ENSMUST00000223969 681 ntBASIC5.93□□□□□ -1.46
P06344 AC167013.4-201ENSMUST00000226712 317 ntBASIC5.93□□□□□ -1.46
P06344 AC125117.2-201ENSMUST00000228344 1140 ntBASIC5.93□□□□□ -1.46
P06344 AC123665.3-201ENSMUST00000228735 1216 ntBASIC5.93□□□□□ -1.46
P06344 Gm5436-201ENSMUST00000058103 643 ntBASIC5.93□□□□□ -1.46
P06344 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
P06344 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
P06344 AC122828.2-201ENSMUST00000222511 2880 ntBASIC5.93□□□□□ -1.46
P06344 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
P06344 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
P06344 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
P06344 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.93□□□□□ -1.46
P06344 Gm10862-201ENSMUST00000193956 3350 ntBASIC5.93□□□□□ -1.46
P06344 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
P06344 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
P06344 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
P06344 Gm43335-201ENSMUST00000198299 3276 ntBASIC5.93□□□□□ -1.46
P06344 Gm14896-201ENSMUST00000121311 1351 ntBASIC5.93□□□□□ -1.46
P06344 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
P06344 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC5.92□□□□□ -1.46
P06344 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
P06344 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
P06344 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
P06344 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
P06344 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
P06344 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
P06344 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
P06344 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC5.92□□□□□ -1.46
P06344 Gm21051-201ENSMUST00000221757 1688 ntBASIC5.92□□□□□ -1.46
P06344 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
P06344 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
P06344 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
P06344 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
P06344 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
P06344 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
P06344 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
P06344 Gm12713-201ENSMUST00000118404 764 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 114.2 ms