Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Lrrc51-204ENSMUST00000106964 872 ntTSL 2 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm13929-201ENSMUST00000117553 1125 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm11212-201ENSMUST00000118337 618 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Vmn1r-ps103-201ENSMUST00000120171 893 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm14989-201ENSMUST00000120497 207 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm11797-201ENSMUST00000121336 754 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm16407-201ENSMUST00000122134 567 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 1700125H03Rik-202ENSMUST00000139265 637 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm24773-201ENSMUST00000158513 99 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm15508-201ENSMUST00000160330 325 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm22111-201ENSMUST00000178010 79 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm23687-201ENSMUST00000178664 79 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm24566-201ENSMUST00000179286 79 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm23305-201ENSMUST00000179342 79 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm26389-201ENSMUST00000179819 79 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm22130-201ENSMUST00000179979 79 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm22393-201ENSMUST00000180153 79 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm25085-201ENSMUST00000180298 79 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm26914-201ENSMUST00000182262 223 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Mir6919-201ENSMUST00000185146 62 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 I830127L07Rik-202ENSMUST00000190944 405 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm38203-201ENSMUST00000191815 245 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm45446-201ENSMUST00000209348 216 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 AC153801.1-201ENSMUST00000217904 947 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 AC154382.1-201ENSMUST00000220958 1282 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm31063-201ENSMUST00000222636 580 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Sult6b1-201ENSMUST00000042683 839 ntTSL 5 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Olfr402-201ENSMUST00000073675 1012 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm6807-201ENSMUST00000077435 888 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm24924-201ENSMUST00000084007 164 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Smc1a-201ENSMUST00000045312 4691 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm37138-201ENSMUST00000194564 2089 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Pcdh1F7BJK1 Gm37598-201ENSMUST00000194506 1301 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Pramef20-201ENSMUST00000121109 1434 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gdpd4-201ENSMUST00000041860 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 4930516K23Rik-201ENSMUST00000074064 6133 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gm19801-201ENSMUST00000218231 1882 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Kdm5d-201ENSMUST00000055032 7974 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Mir546-201ENSMUST00000102105 121 ntBASIC6.5□□□□□ -1.37
Pcdh1F7BJK1 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms