Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm43864-201ENSMUST00000204452 4028 ntBASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim3Q9R1R2 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Gm10568-201ENSMUST00000193244 1634 ntBASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Gm42541-201ENSMUST00000199871 2249 ntBASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Gm14865-201ENSMUST00000117523 494 ntBASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Gm13732-201ENSMUST00000117753 535 ntBASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Gm23888-201ENSMUST00000122690 253 ntBASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Gm16297-201ENSMUST00000161466 459 ntBASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Mir7033-201ENSMUST00000184259 81 ntBASIC6.29□□□□□ -1.4
Trim3Q9R1R2 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Ighv5-5-201ENSMUST00000193826 329 ntBASIC6.29□□□□□ -1.4
Trim3Q9R1R2 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 AC131654.1-201ENSMUST00000219675 745 ntBASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.29□□□□□ -1.4
Trim3Q9R1R2 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm12468-201ENSMUST00000116189 404 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm15310-201ENSMUST00000117891 372 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm15712-201ENSMUST00000120369 1156 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm13754-201ENSMUST00000120486 998 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm13877-201ENSMUST00000120614 417 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm6451-201ENSMUST00000121488 717 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm10130-201ENSMUST00000133235 303 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm17217-201ENSMUST00000166613 469 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm25617-201ENSMUST00000179548 133 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm25617-202ENSMUST00000198387 132 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm17822-201ENSMUST00000204307 351 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm44111-201ENSMUST00000204649 399 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm3678-201ENSMUST00000218888 492 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Gm5436-201ENSMUST00000058103 643 ntBASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim3Q9R1R2 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms