Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Ube3bQ9ES34 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Ube3bQ9ES34 Gm44116-201ENSMUST00000204269 1525 ntBASIC9.05□□□□□ -0.96
Ube3bQ9ES34 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Ube3bQ9ES34 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC9.05□□□□□ -0.96
Ube3bQ9ES34 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Ube3bQ9ES34 Gm44624-201ENSMUST00000208700 2278 ntBASIC9.05□□□□□ -0.96
Ube3bQ9ES34 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Npr3-204ENSMUST00000228489 1969 ntBASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm42514-201ENSMUST00000196636 1832 ntBASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm22426-201ENSMUST00000103811 96 ntBASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm22470-201ENSMUST00000104117 130 ntBASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm15913-201ENSMUST00000118492 331 ntBASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm16057-201ENSMUST00000120811 759 ntBASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm7369-201ENSMUST00000192738 936 ntBASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm19057-201ENSMUST00000194329 1197 ntBASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm5001-201ENSMUST00000204361 331 ntBASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm44979-201ENSMUST00000206218 287 ntBASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm38430-201ENSMUST00000209888 1240 ntBASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 AC158392.2-201ENSMUST00000225402 969 ntBASIC9.04□□□□□ -0.96
Ube3bQ9ES34 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 AC154283.1-201ENSMUST00000228417 389 ntBASIC9.04□□□□□ -0.96
Ube3bQ9ES34 AC121114.1-201ENSMUST00000228522 570 ntBASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm20302-201ENSMUST00000080671 275 ntBASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Gm44117-201ENSMUST00000204442 1758 ntBASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC9.04□□□□□ -0.96
Ube3bQ9ES34 AC130219.1-201ENSMUST00000228406 3433 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Dalir-201ENSMUST00000188773 2170 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Pcdh12-201ENSMUST00000025311 3859 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Mir503-201ENSMUST00000102168 71 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm11864-201ENSMUST00000116179 1220 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm15054-201ENSMUST00000117393 281 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm15778-201ENSMUST00000118469 608 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm15763-201ENSMUST00000120136 403 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm13574-201ENSMUST00000120482 394 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm12593-201ENSMUST00000120981 743 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm11895-201ENSMUST00000122165 467 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC9.03□□□□□ -0.96
Ube3bQ9ES34 Gm16362-201ENSMUST00000135189 214 ntBASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms