Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm23734-201ENSMUST00000083753 109 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm37132-201ENSMUST00000195553 2238 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 AC121094.1-201ENSMUST00000224766 1345 ntBASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm22774-201ENSMUST00000102084 109 ntBASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm26417-201ENSMUST00000104274 135 ntBASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm26183-201ENSMUST00000157685 139 ntBASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Mir1930-201ENSMUST00000158799 84 ntBASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm17205-201ENSMUST00000168370 1207 ntBASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm18848-201ENSMUST00000182069 792 ntBASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm44559-201ENSMUST00000207177 1012 ntBASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm2221-201ENSMUST00000209342 418 ntBASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 CT030662.3-201ENSMUST00000228751 476 ntBASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm42885-201ENSMUST00000200763 4214 ntBASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Gm43395-201ENSMUST00000198717 2240 ntBASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Ddx56Q9D0R4 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm42645-201ENSMUST00000201573 1627 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm45793-201ENSMUST00000207900 1342 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm37142-201ENSMUST00000193718 3110 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 AC122263.1-201ENSMUST00000228636 2805 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm43781-201ENSMUST00000197634 2681 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm12635-201ENSMUST00000117285 752 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm13900-201ENSMUST00000119402 498 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm11245-201ENSMUST00000119419 1037 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm15225-201ENSMUST00000120449 1017 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 Gm12903-201ENSMUST00000121015 544 ntBASIC7.3□□□□□ -1.24
Ddx56Q9D0R4 BC064078-201ENSMUST00000122939 570 ntBASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms