Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm43542-201ENSMUST00000199505 379 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm31579-201ENSMUST00000203306 966 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm44770-201ENSMUST00000205395 1264 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 AL713985.1-201ENSMUST00000219030 420 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm18955-201ENSMUST00000223173 649 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm9801-201ENSMUST00000054860 408 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm16391-201ENSMUST00000086601 447 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Olfr742-201ENSMUST00000089836 1120 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm6729-201ENSMUST00000165173 1452 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm42798-201ENSMUST00000200853 3972 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm44530-201ENSMUST00000207920 3559 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Gm37703-201ENSMUST00000192292 1784 ntBASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Ccdc9Q8VC31 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Ccdc9Q8VC31 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Ccdc9Q8VC31 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Ccdc9Q8VC31 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC7.96□□□□□ -1.13
Ccdc9Q8VC31 Gm37082-201ENSMUST00000192629 1927 ntBASIC7.96□□□□□ -1.13
Ccdc9Q8VC31 Gm25760-201ENSMUST00000103989 132 ntBASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Gm14606-201ENSMUST00000117078 1155 ntBASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Gm13552-201ENSMUST00000118837 417 ntBASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Gm13915-201ENSMUST00000119314 931 ntBASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Mir5128-201ENSMUST00000175217 84 ntBASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Gm24576-201ENSMUST00000175508 248 ntBASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Gm9451-201ENSMUST00000188491 604 ntBASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Gm29160-201ENSMUST00000190094 699 ntBASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Gm42883-201ENSMUST00000202594 222 ntBASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Gm43926-201ENSMUST00000203978 430 ntBASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 CT009546.3-201ENSMUST00000220914 208 ntBASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 AC154785.1-201ENSMUST00000223280 572 ntBASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 AC123061.2-201ENSMUST00000226234 802 ntBASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 AC130673.1-201ENSMUST00000227992 435 ntBASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Ccdc9Q8VC31 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Fam26d-202ENSMUST00000218239 3075 ntBASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Gm42520-201ENSMUST00000199642 1502 ntBASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Gm25167-201ENSMUST00000104188 120 ntBASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Lair1-204ENSMUST00000108600 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Gm15203-201ENSMUST00000117668 455 ntBASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Gm8534-201ENSMUST00000118553 766 ntBASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Gm5601-201ENSMUST00000118909 972 ntBASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Gm11925-201ENSMUST00000121375 535 ntBASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Gm17057-201ENSMUST00000169887 591 ntTSL 3 BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Rbx1-ps-201ENSMUST00000173786 327 ntBASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Gm22408-201ENSMUST00000174925 65 ntBASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Mir8099-2-201ENSMUST00000183568 127 ntBASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Mir8099-1-201ENSMUST00000184238 127 ntBASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Gm42580-201ENSMUST00000197223 753 ntBASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 AC137678.1-201ENSMUST00000198370 118 ntBASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Gm4032-201ENSMUST00000210886 487 ntBASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 AC137950.1-201ENSMUST00000228553 515 ntBASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Pdcl2-201ENSMUST00000031145 1181 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Ccdc9Q8VC31 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms