Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm3511-201ENSMUST00000199823 204 ntBASIC7.89□□□□□ -1.15
Vps53Q8CCB4 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC7.89□□□□□ -1.15
Vps53Q8CCB4 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC7.89□□□□□ -1.15
Vps53Q8CCB4 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.89□□□□□ -1.15
Vps53Q8CCB4 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC7.89□□□□□ -1.15
Vps53Q8CCB4 AC154323.2-201ENSMUST00000226557 1151 ntBASIC7.89□□□□□ -1.15
Vps53Q8CCB4 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Vps53Q8CCB4 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Vps53Q8CCB4 Gm24451-201ENSMUST00000083353 133 ntBASIC7.89□□□□□ -1.15
Vps53Q8CCB4 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
Vps53Q8CCB4 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Vps53Q8CCB4 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Vps53Q8CCB4 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Vps53Q8CCB4 Gm43577-201ENSMUST00000197090 3344 ntBASIC7.89□□□□□ -1.15
Vps53Q8CCB4 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Vps53Q8CCB4 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Vps53Q8CCB4 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Vps53Q8CCB4 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 AC125487.2-201ENSMUST00000219810 1300 ntBASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Gm8822-201ENSMUST00000118948 2347 ntBASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Apoa2-204ENSMUST00000111321 518 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Gm14116-201ENSMUST00000117733 805 ntBASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Gm15696-201ENSMUST00000121730 445 ntBASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Gm44251-201ENSMUST00000204963 442 ntBASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Gm2221-201ENSMUST00000209342 418 ntBASIC7.88□□□□□ -1.15
Vps53Q8CCB4 AC165349.1-201ENSMUST00000217896 424 ntBASIC7.88□□□□□ -1.15
Vps53Q8CCB4 AC131654.1-201ENSMUST00000219675 745 ntBASIC7.88□□□□□ -1.15
Vps53Q8CCB4 AC167013.4-201ENSMUST00000226712 317 ntBASIC7.88□□□□□ -1.15
Vps53Q8CCB4 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 n-R5s95-201ENSMUST00000082684 118 ntBASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 AC126549.1-201ENSMUST00000225044 3687 ntBASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Gm43363-201ENSMUST00000201590 2647 ntBASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Vps53Q8CCB4 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm9874-202ENSMUST00000194957 1464 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm14615-201ENSMUST00000117575 1816 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm37169-201ENSMUST00000195599 4161 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm43842-201ENSMUST00000202890 2982 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 AC192333.5-201ENSMUST00000224620 2350 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm14729-201ENSMUST00000118373 689 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm13669-201ENSMUST00000122366 457 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm16248-201ENSMUST00000124238 243 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm9710-201ENSMUST00000198053 499 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm7452-201ENSMUST00000200764 788 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Gm44548-201ENSMUST00000208929 192 ntBASIC7.87□□□□□ -1.15
Vps53Q8CCB4 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Vps53Q8CCB4 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms