Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm11271-201ENSMUST00000116054 440 ntBASIC9.29□□□□□ -0.92
Usp47Q8BY87 Gm13702-201ENSMUST00000118542 825 ntBASIC9.29□□□□□ -0.92
Usp47Q8BY87 Gm11341-201ENSMUST00000122316 447 ntBASIC9.29□□□□□ -0.92
Usp47Q8BY87 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Gm28455-201ENSMUST00000189105 1290 ntBASIC9.29□□□□□ -0.92
Usp47Q8BY87 Gm7891-201ENSMUST00000190284 843 ntBASIC9.29□□□□□ -0.92
Usp47Q8BY87 Gm37135-201ENSMUST00000192652 534 ntBASIC9.29□□□□□ -0.92
Usp47Q8BY87 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usp47Q8BY87 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC9.29□□□□□ -0.92
Usp47Q8BY87 AC135353.1-201ENSMUST00000215330 630 ntBASIC9.29□□□□□ -0.92
Usp47Q8BY87 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usp47Q8BY87 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Gm43496-201ENSMUST00000201682 3001 ntBASIC9.29□□□□□ -0.92
Usp47Q8BY87 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usp47Q8BY87 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Usp47Q8BY87 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Usp47Q8BY87 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC9.28□□□□□ -0.92
Usp47Q8BY87 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Usp47Q8BY87 Gm38124-201ENSMUST00000191710 2581 ntBASIC9.28□□□□□ -0.92
Usp47Q8BY87 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Usp47Q8BY87 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Usp47Q8BY87 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Usp47Q8BY87 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Usp47Q8BY87 Gm11318-201ENSMUST00000118640 961 ntBASIC9.28□□□□□ -0.92
Usp47Q8BY87 Gm11498-201ENSMUST00000120660 949 ntBASIC9.28□□□□□ -0.92
Usp47Q8BY87 Gm6977-201ENSMUST00000121568 512 ntBASIC9.28□□□□□ -0.92
Usp47Q8BY87 Gm23884-201ENSMUST00000122687 294 ntBASIC9.28□□□□□ -0.92
Usp47Q8BY87 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Usp47Q8BY87 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC9.28□□□□□ -0.92
Usp47Q8BY87 Gm10177-201ENSMUST00000160052 444 ntBASIC9.28□□□□□ -0.92
Usp47Q8BY87 Gm4152-201ENSMUST00000172675 259 ntBASIC9.28□□□□□ -0.92
Usp47Q8BY87 Gm45448-201ENSMUST00000211739 209 ntBASIC9.28□□□□□ -0.92
Usp47Q8BY87 CT030254.1-201ENSMUST00000225450 1078 ntBASIC9.28□□□□□ -0.92
Usp47Q8BY87 Gm5341-201ENSMUST00000058881 489 ntBASIC9.28□□□□□ -0.92
Usp47Q8BY87 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC9.28□□□□□ -0.92
Usp47Q8BY87 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Usp47Q8BY87 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC9.28□□□□□ -0.92
Usp47Q8BY87 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Usp47Q8BY87 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Usp47Q8BY87 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Usp47Q8BY87 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Usp47Q8BY87 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Usp47Q8BY87 Sec24c-202ENSMUST00000223751 4196 ntBASIC9.28□□□□□ -0.92
Usp47Q8BY87 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Usp47Q8BY87 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Usp47Q8BY87 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Usp47Q8BY87 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.92
Usp47Q8BY87 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm22374-201ENSMUST00000104583 132 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm22103-201ENSMUST00000116733 121 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm26475-201ENSMUST00000116769 121 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm23620-201ENSMUST00000116812 121 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm25042-201ENSMUST00000116856 121 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm25540-201ENSMUST00000116880 121 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm11920-201ENSMUST00000118491 563 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm23550-201ENSMUST00000179003 121 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm25123-201ENSMUST00000179154 121 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm25353-201ENSMUST00000179366 121 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm22992-201ENSMUST00000179496 121 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm25892-201ENSMUST00000179867 121 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm24092-201ENSMUST00000180257 121 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm37376-201ENSMUST00000192176 453 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm26442-201ENSMUST00000082588 153 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usp47Q8BY87 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Usp47Q8BY87 Kcnk10-202ENSMUST00000221240 7460 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp47Q8BY87 AC130217.2-201ENSMUST00000224009 2990 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp47Q8BY87 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp47Q8BY87 Gm37725-201ENSMUST00000193965 2125 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp47Q8BY87 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp47Q8BY87 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp47Q8BY87 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Usp47Q8BY87 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Usp47Q8BY87 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC9.27□□□□□ -0.93
Usp47Q8BY87 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Usp47Q8BY87 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Usp47Q8BY87 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 240 ms