Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Cdc14b-202ENSMUST00000109769 2886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Rif1Q6PR54 AC154347.1-201ENSMUST00000221358 3105 ntBASIC5.77□□□□□ -1.49
Rif1Q6PR54 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Rif1Q6PR54 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Rif1Q6PR54 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Rif1Q6PR54 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Rif1Q6PR54 Gm37530-201ENSMUST00000191759 4932 ntBASIC5.77□□□□□ -1.49
Rif1Q6PR54 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.77□□□□□ -1.49
Rif1Q6PR54 Idi2-201ENSMUST00000038598 2253 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Rif1Q6PR54 Odf2-204ENSMUST00000113756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Rif1Q6PR54 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Rif1Q6PR54 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Rif1Q6PR54 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.77□□□□□ -1.49
Rif1Q6PR54 Gm15781-201ENSMUST00000120216 323 ntBASIC5.77□□□□□ -1.49
Rif1Q6PR54 Gm15242-201ENSMUST00000122459 283 ntBASIC5.77□□□□□ -1.49
Rif1Q6PR54 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC5.77□□□□□ -1.49
Rif1Q6PR54 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Rif1Q6PR54 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Rif1Q6PR54 Gm44768-201ENSMUST00000205719 393 ntBASIC5.77□□□□□ -1.49
Rif1Q6PR54 Gm44565-201ENSMUST00000208194 269 ntBASIC5.77□□□□□ -1.49
Rif1Q6PR54 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC5.77□□□□□ -1.49
Rif1Q6PR54 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Rif1Q6PR54 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Rif1Q6PR54 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC5.77□□□□□ -1.49
Rif1Q6PR54 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
Rif1Q6PR54 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Rif1Q6PR54 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Rif1Q6PR54 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Rif1Q6PR54 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm24125-201ENSMUST00000104105 137 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm12808-201ENSMUST00000120597 404 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm5456-201ENSMUST00000170706 844 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm17045-201ENSMUST00000178600 844 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm35323-201ENSMUST00000191836 499 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm9332-201ENSMUST00000198431 730 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm5324-201ENSMUST00000208115 476 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 Olfr107-201ENSMUST00000077008 1033 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 AC165260.6-202ENSMUST00000224959 1958 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm43980-201ENSMUST00000204899 1612 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm9499-201ENSMUST00000180888 964 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm8896-201ENSMUST00000197434 1106 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gm43141-201ENSMUST00000199695 274 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 AC162934.2-201ENSMUST00000221451 249 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 CT009733.1-202ENSMUST00000224941 441 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 AC154806.5-204ENSMUST00000228900 867 ntBASIC5.76□□□□□ -1.49
Rif1Q6PR54 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Rif1Q6PR54 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Rif1Q6PR54 Gm28649-201ENSMUST00000189153 1581 ntBASIC5.75□□□□□ -1.49
Rif1Q6PR54 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC5.75□□□□□ -1.49
Rif1Q6PR54 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Rif1Q6PR54 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Rif1Q6PR54 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms