Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm8182-201ENSMUST00000197863 769 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Ighv1-65-201ENSMUST00000198790 349 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm44463-201ENSMUST00000198895 137 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm44940-201ENSMUST00000206225 1247 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 AC192091.1-201ENSMUST00000218668 439 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 AC132247.1-201ENSMUST00000225930 585 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 AC157572.1-201ENSMUST00000227187 825 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 CT025525.3-201ENSMUST00000228858 366 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm23458-201ENSMUST00000083257 169 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Akap7-202ENSMUST00000095779 919 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm10581-201ENSMUST00000097986 231 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm37043-201ENSMUST00000194609 3105 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm13456-201ENSMUST00000118928 1365 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim63Q38HM4 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm1982-201ENSMUST00000188615 1887 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm45793-201ENSMUST00000207900 1342 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Itgb1bp2-201ENSMUST00000033674 1314 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm45634-201ENSMUST00000209736 1990 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Rnu11-201ENSMUST00000104135 134 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Spata17-202ENSMUST00000110945 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm12131-201ENSMUST00000117479 359 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm2288-201ENSMUST00000118560 638 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm14769-201ENSMUST00000118590 432 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm12757-201ENSMUST00000119465 800 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm15504-201ENSMUST00000119674 265 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm15702-201ENSMUST00000119680 444 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm11474-201ENSMUST00000120814 277 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm12372-201ENSMUST00000121654 768 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm12094-201ENSMUST00000121781 472 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm6706-201ENSMUST00000145087 318 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm3355-201ENSMUST00000160079 487 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Mir1264-201ENSMUST00000175381 86 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm8974-201ENSMUST00000175770 479 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 n-R5s210-201ENSMUST00000177688 119 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm7893-201ENSMUST00000189666 225 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm2021-201ENSMUST00000190623 464 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 1110025M09Rik-201ENSMUST00000192082 855 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm35106-201ENSMUST00000192731 250 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm36932-201ENSMUST00000195226 929 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm44245-201ENSMUST00000204304 232 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm5027-201ENSMUST00000206700 375 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm10046-202ENSMUST00000208942 126 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm45401-201ENSMUST00000209456 733 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm8168-201ENSMUST00000209631 948 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm7965-201ENSMUST00000211675 1105 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm45925-202ENSMUST00000219904 1136 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 AC159622.1-201ENSMUST00000221004 554 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Slc36a3-202ENSMUST00000069816 893 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
Trim63Q38HM4 Gm24405-201ENSMUST00000083033 167 ntBASIC5.79□□□□□ -1.48
Trim63Q38HM4 Tcl1b1-201ENSMUST00000085043 1040 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms