Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC6.08□□□□□ -1.44
Scn1bP97952 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Gm8077-201ENSMUST00000209221 1024 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC6.08□□□□□ -1.44
Scn1bP97952 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC6.08□□□□□ -1.44
Scn1bP97952 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC6.08□□□□□ -1.44
Scn1bP97952 AC157571.1-201ENSMUST00000222014 520 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 CT025552.1-201ENSMUST00000224561 521 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Scn1bP97952 Gm5341-201ENSMUST00000058881 489 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 Snora9-201ENSMUST00000082579 133 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Scn1bP97952 Gm9408-201ENSMUST00000197375 1505 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Scn1bP97952 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Scn1bP97952 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC6.08□□□□□ -1.44
Scn1bP97952 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Scn1bP97952 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Scn1bP97952 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
Scn1bP97952 Gm18757-201ENSMUST00000207938 3141 ntBASIC6.08□□□□□ -1.44
Scn1bP97952 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Scn1bP97952 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Scn1bP97952 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 AC160029.1-201ENSMUST00000219628 2678 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Scn1bP97952 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Scn1bP97952 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC6.07□□□□□ -1.44
Scn1bP97952 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.07□□□□□ -1.44
Scn1bP97952 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Scn1bP97952 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Scn1bP97952 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Scn1bP97952 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Scn1bP97952 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Scn1bP97952 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Gm7831-201ENSMUST00000117990 552 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.07□□□□□ -1.44
Scn1bP97952 Gm5387-201ENSMUST00000119776 857 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Gm12727-201ENSMUST00000119885 359 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Scn1bP97952 Gm15160-201ENSMUST00000120553 907 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Gm15786-201ENSMUST00000121079 450 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.07□□□□□ -1.44
Scn1bP97952 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Gm29161-201ENSMUST00000188250 699 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.07□□□□□ -1.44
Scn1bP97952 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Scn1bP97952 Gm37560-201ENSMUST00000194289 1000 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Gm37490-201ENSMUST00000195566 724 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Gm2505-201ENSMUST00000200413 825 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Gm31579-201ENSMUST00000203306 966 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Klra13-ps-203ENSMUST00000204367 850 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC6.07□□□□□ -1.44
Scn1bP97952 Gm45446-201ENSMUST00000209348 216 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Gm45478-201ENSMUST00000209472 211 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Gm45370-201ENSMUST00000211274 483 ntTSL 5 BASIC6.07□□□□□ -1.44
Scn1bP97952 AC126554.4-201ENSMUST00000221055 409 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 AC132433.1-201ENSMUST00000221553 1101 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Zfp874a-208ENSMUST00000225479 1092 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 AC080021.1-201ENSMUST00000228104 700 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Scn1bP97952 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.07□□□□□ -1.44
Scn1bP97952 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
Scn1bP97952 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC6.07□□□□□ -1.44
Scn1bP97952 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Scn1bP97952 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Scn1bP97952 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scn1bP97952 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Scn1bP97952 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 137.8 ms