Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Gm27210-201ENSMUST00000184263 402 ntBASIC8.6□□□□□ -1.03
Smarcc1P97496 Gm38122-201ENSMUST00000192679 885 ntBASIC8.6□□□□□ -1.03
Smarcc1P97496 Gm38097-201ENSMUST00000192936 439 ntBASIC8.6□□□□□ -1.03
Smarcc1P97496 Gm37517-201ENSMUST00000194004 1289 ntBASIC8.6□□□□□ -1.03
Smarcc1P97496 Gm37072-201ENSMUST00000194570 837 ntBASIC8.6□□□□□ -1.03
Smarcc1P97496 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC8.6□□□□□ -1.03
Smarcc1P97496 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC8.6□□□□□ -1.03
Smarcc1P97496 Gm7492-201ENSMUST00000201745 725 ntBASIC8.6□□□□□ -1.03
Smarcc1P97496 Gm7554-201ENSMUST00000202282 574 ntBASIC8.6□□□□□ -1.03
Smarcc1P97496 Gm44694-201ENSMUST00000205317 1298 ntBASIC8.6□□□□□ -1.03
Smarcc1P97496 Gm18600-201ENSMUST00000207205 505 ntBASIC8.6□□□□□ -1.03
Smarcc1P97496 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Smarcc1P97496 Gm19186-201ENSMUST00000219922 333 ntBASIC8.6□□□□□ -1.03
Smarcc1P97496 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Smarcc1P97496 Gm25587-201ENSMUST00000082498 166 ntBASIC8.6□□□□□ -1.03
Smarcc1P97496 n-R5s97-201ENSMUST00000082585 113 ntBASIC8.6□□□□□ -1.03
Smarcc1P97496 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.6□□□□□ -1.03
Smarcc1P97496 Gm18716-201ENSMUST00000204507 1603 ntBASIC8.6□□□□□ -1.03
Smarcc1P97496 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
Smarcc1P97496 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Smarcc1P97496 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC8.6□□□□□ -1.03
Smarcc1P97496 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
Smarcc1P97496 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
Smarcc1P97496 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC8.6□□□□□ -1.03
Smarcc1P97496 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Smarcc1P97496 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
Smarcc1P97496 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Smarcc1P97496 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm16123-201ENSMUST00000118647 1517 ntBASIC8.59□□□□□ -1.03
Smarcc1P97496 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm5841-201ENSMUST00000195307 2177 ntBASIC8.59□□□□□ -1.03
Smarcc1P97496 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Smarcc1P97496 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Smarcc1P97496 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Smarcc1P97496 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC8.59□□□□□ -1.03
Smarcc1P97496 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Smarcc1P97496 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Smarcc1P97496 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Smarcc1P97496 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Smarcc1P97496 Rnu11-201ENSMUST00000104135 134 ntBASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm15502-201ENSMUST00000121449 208 ntBASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm25178-201ENSMUST00000122633 325 ntBASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Smarcc1P97496 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm17048-201ENSMUST00000179266 847 ntBASIC8.59□□□□□ -1.03
Smarcc1P97496 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm28620-201ENSMUST00000190463 439 ntBASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm29288-201ENSMUST00000191582 901 ntBASIC8.59□□□□□ -1.03
Smarcc1P97496 Igkv12-67-201ENSMUST00000197806 354 ntBASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC8.59□□□□□ -1.03
Smarcc1P97496 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm7499-201ENSMUST00000210423 813 ntBASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm18043-201ENSMUST00000216741 739 ntBASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm7588-201ENSMUST00000216866 571 ntBASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm17849-201ENSMUST00000219788 853 ntBASIC8.59□□□□□ -1.03
Smarcc1P97496 AC132833.4-201ENSMUST00000228313 203 ntBASIC8.59□□□□□ -1.03
Smarcc1P97496 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Smarcc1P97496 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Smarcc1P97496 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Smarcc1P97496 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Smarcc1P97496 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Smarcc1P97496 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Smarcc1P97496 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.59□□□□□ -1.03
Smarcc1P97496 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Smarcc1P97496 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Smarcc1P97496 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Smarcc1P97496 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Smarcc1P97496 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Smarcc1P97496 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Smarcc1P97496 Slco6b1-202ENSMUST00000178359 1778 ntBASIC8.58□□□□□ -1.04
Smarcc1P97496 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Smarcc1P97496 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Smarcc1P97496 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
Smarcc1P97496 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Smarcc1P97496 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Smarcc1P97496 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Smarcc1P97496 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Smarcc1P97496 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Smarcc1P97496 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC8.58□□□□□ -1.04
Smarcc1P97496 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC8.58□□□□□ -1.04
Smarcc1P97496 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Smarcc1P97496 Gm8648-201ENSMUST00000122457 221 ntBASIC8.58□□□□□ -1.04
Smarcc1P97496 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC8.58□□□□□ -1.04
Smarcc1P97496 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC8.58□□□□□ -1.04
Smarcc1P97496 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC8.58□□□□□ -1.04
Smarcc1P97496 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC8.58□□□□□ -1.04
Smarcc1P97496 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC8.58□□□□□ -1.04
Smarcc1P97496 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Smarcc1P97496 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC8.58□□□□□ -1.04
Smarcc1P97496 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Smarcc1P97496 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Smarcc1P97496 Gm26570-201ENSMUST00000180672 342 ntBASIC8.58□□□□□ -1.04
Smarcc1P97496 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Smarcc1P97496 Gm27030-201ENSMUST00000182551 464 ntBASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms