Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hmgb1P63158 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hmgb1P63158 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hmgb1P63158 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Hmgb1P63158 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Hmgb1P63158 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm22439-201ENSMUST00000104048 132 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm6490-201ENSMUST00000111862 461 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm13137-201ENSMUST00000118035 345 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm12740-201ENSMUST00000118794 308 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm12944-201ENSMUST00000119262 463 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm12477-201ENSMUST00000121221 571 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm15096-201ENSMUST00000121918 878 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm23276-201ENSMUST00000157913 138 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm16026-205ENSMUST00000162923 641 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Mir6357-201ENSMUST00000184246 104 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Hmgb1P63158 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm8101-201ENSMUST00000192796 478 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm10416-201ENSMUST00000197379 645 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm42965-201ENSMUST00000201254 250 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm45008-201ENSMUST00000206420 493 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm45756-201ENSMUST00000212491 407 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Hmgb1P63158 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC7.77□□□□□ -1.17
Hmgb1P63158 AC133948.2-201ENSMUST00000217850 378 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC7.77□□□□□ -1.17
Hmgb1P63158 CT030166.4-201ENSMUST00000220640 404 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 CT025639.2-201ENSMUST00000224440 1220 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm4953-201ENSMUST00000077309 483 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm22005-201ENSMUST00000082795 141 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm22053-201ENSMUST00000083394 200 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Mir484-201ENSMUST00000093566 67 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hmgb1P63158 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hmgb1P63158 Olfr20-202ENSMUST00000120137 2390 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Hmgb1P63158 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hmgb1P63158 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm44704-201ENSMUST00000208963 1990 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Hmgb1P63158 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Hmgb1P63158 Gm5605-201ENSMUST00000208940 1305 ntBASIC7.77□□□□□ -1.17
Hmgb1P63158 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Hmgb1P63158 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hmgb1P63158 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Hmgb1P63158 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Hmgb1P63158 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Hmgb1P63158 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Hmgb1P63158 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Hmgb1P63158 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Hmgb1P63158 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Hmgb1P63158 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Hmgb1P63158 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Hmgb1P63158 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Hmgb1P63158 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Hmgb1P63158 Cmah-208ENSMUST00000224819 9482 ntBASIC7.76□□□□□ -1.17
Hmgb1P63158 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Hmgb1P63158 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.76□□□□□ -1.17
Hmgb1P63158 Gm25614-201ENSMUST00000104013 133 ntBASIC7.76□□□□□ -1.17
Hmgb1P63158 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Hmgb1P63158 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC7.76□□□□□ -1.17
Hmgb1P63158 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Hmgb1P63158 Gm14727-201ENSMUST00000118526 525 ntBASIC7.76□□□□□ -1.17
Hmgb1P63158 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Hmgb1P63158 Gm11259-201ENSMUST00000120554 715 ntBASIC7.76□□□□□ -1.17
Hmgb1P63158 Gm14721-201ENSMUST00000121381 525 ntBASIC7.76□□□□□ -1.17
Hmgb1P63158 Tex35-204ENSMUST00000121911 805 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Hmgb1P63158 Gm14990-201ENSMUST00000122354 445 ntBASIC7.76□□□□□ -1.17
Hmgb1P63158 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC7.76□□□□□ -1.17
Hmgb1P63158 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Hmgb1P63158 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC7.76□□□□□ -1.17
Hmgb1P63158 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Hmgb1P63158 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC7.76□□□□□ -1.17
Hmgb1P63158 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC7.76□□□□□ -1.17
Hmgb1P63158 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.76□□□□□ -1.17
Hmgb1P63158 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Hmgb1P63158 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms