Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Gm43689-201ENSMUST00000195951 427 ntBASIC6.59□□□□□ -1.35
Fdft1P53798 Gm44213-201ENSMUST00000204977 703 ntBASIC6.59□□□□□ -1.35
Fdft1P53798 Gm9652-201ENSMUST00000209345 163 ntBASIC6.59□□□□□ -1.35
Fdft1P53798 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.59□□□□□ -1.35
Fdft1P53798 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.59□□□□□ -1.35
Fdft1P53798 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.59□□□□□ -1.35
Fdft1P53798 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Fdft1P53798 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Fdft1P53798 Gm6887-201ENSMUST00000080945 482 ntBASIC6.59□□□□□ -1.35
Fdft1P53798 Gm24411-201ENSMUST00000083428 131 ntBASIC6.59□□□□□ -1.35
Fdft1P53798 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.59□□□□□ -1.35
Fdft1P53798 Gm43880-201ENSMUST00000203635 2162 ntBASIC6.59□□□□□ -1.35
Fdft1P53798 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Fdft1P53798 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Fdft1P53798 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Fdft1P53798 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Fdft1P53798 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Fdft1P53798 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Fdft1P53798 Gm21122-201ENSMUST00000191548 3452 ntBASIC6.59□□□□□ -1.36
Fdft1P53798 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Fdft1P53798 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Fdft1P53798 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
Fdft1P53798 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.58□□□□□ -1.36
Fdft1P53798 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Fdft1P53798 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Fdft1P53798 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC6.58□□□□□ -1.36
Fdft1P53798 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Fdft1P53798 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Fdft1P53798 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Fdft1P53798 AC122305.1-201ENSMUST00000214803 3921 ntBASIC6.58□□□□□ -1.36
Fdft1P53798 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Fdft1P53798 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Fdft1P53798 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.58□□□□□ -1.36
Fdft1P53798 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Fdft1P53798 Gm12447-201ENSMUST00000119110 470 ntBASIC6.58□□□□□ -1.36
Fdft1P53798 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.58□□□□□ -1.36
Fdft1P53798 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Fdft1P53798 Gm24680-201ENSMUST00000158759 126 ntBASIC6.58□□□□□ -1.36
Fdft1P53798 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC6.58□□□□□ -1.36
Fdft1P53798 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Fdft1P53798 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Fdft1P53798 Gm37493-201ENSMUST00000193167 433 ntBASIC6.58□□□□□ -1.36
Fdft1P53798 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC6.58□□□□□ -1.36
Fdft1P53798 Gm43157-201ENSMUST00000198223 412 ntBASIC6.58□□□□□ -1.36
Fdft1P53798 Gm17822-201ENSMUST00000204307 351 ntBASIC6.58□□□□□ -1.36
Fdft1P53798 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Fdft1P53798 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.58□□□□□ -1.36
Fdft1P53798 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.58□□□□□ -1.36
Fdft1P53798 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.58□□□□□ -1.36
Fdft1P53798 Gm4042-201ENSMUST00000216946 637 ntBASIC6.58□□□□□ -1.36
Fdft1P53798 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC6.58□□□□□ -1.36
Fdft1P53798 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC6.58□□□□□ -1.36
Fdft1P53798 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC6.58□□□□□ -1.36
Fdft1P53798 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC6.58□□□□□ -1.36
Fdft1P53798 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Fdft1P53798 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Fdft1P53798 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Fdft1P53798 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Fdft1P53798 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.58□□□□□ -1.36
Fdft1P53798 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.58□□□□□ -1.36
Fdft1P53798 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Fdft1P53798 Olfr1348-209ENSMUST00000213549 2714 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Fdft1P53798 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Fdft1P53798 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Fdft1P53798 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Fdft1P53798 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.58□□□□□ -1.36
Fdft1P53798 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Fdft1P53798 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.58□□□□□ -1.36
Fdft1P53798 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Fdft1P53798 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Fdft1P53798 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Fdft1P53798 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Fdft1P53798 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.57□□□□□ -1.36
Fdft1P53798 AC167013.5-201ENSMUST00000227597 2947 ntBASIC6.57□□□□□ -1.36
Fdft1P53798 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Fdft1P53798 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Fdft1P53798 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.57□□□□□ -1.36
Fdft1P53798 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Fdft1P53798 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.57□□□□□ -1.36
Fdft1P53798 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Fdft1P53798 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Fdft1P53798 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
Fdft1P53798 Gm23748-201ENSMUST00000104227 131 ntBASIC6.57□□□□□ -1.36
Fdft1P53798 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC6.57□□□□□ -1.36
Fdft1P53798 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.57□□□□□ -1.36
Fdft1P53798 Gm13469-201ENSMUST00000118231 350 ntBASIC6.57□□□□□ -1.36
Fdft1P53798 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.57□□□□□ -1.36
Fdft1P53798 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.57□□□□□ -1.36
Fdft1P53798 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC6.57□□□□□ -1.36
Fdft1P53798 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Fdft1P53798 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC6.57□□□□□ -1.36
Fdft1P53798 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Fdft1P53798 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.57□□□□□ -1.36
Fdft1P53798 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.57□□□□□ -1.36
Fdft1P53798 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.57□□□□□ -1.36
Fdft1P53798 Gm24157-201ENSMUST00000175265 111 ntBASIC6.57□□□□□ -1.36
Fdft1P53798 Gm27042-201ENSMUST00000181109 1097 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Fdft1P53798 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.57□□□□□ -1.36
Fdft1P53798 Gm27152-201ENSMUST00000183828 99 ntBASIC6.57□□□□□ -1.36
Fdft1P53798 Gm28941-201ENSMUST00000185536 1017 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms