Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Sdc1P18828 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Sdc1P18828 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Sdc1P18828 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Sdc1P18828 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Sdc1P18828 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Sdc1P18828 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 CT009734.1-201ENSMUST00000227657 1687 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sdc1P18828 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Sdc1P18828 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.31□□□□□ -1.56
Sdc1P18828 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm38096-201ENSMUST00000193692 2389 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Gm43515-201ENSMUST00000197930 2141 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sdc1P18828 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.3□□□□□ -1.56
Sdc1P18828 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sdc1P18828 AC164092.3-201ENSMUST00000216970 1323 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sdc1P18828 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sdc1P18828 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sdc1P18828 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Gm13196-201ENSMUST00000118297 379 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Gm14870-201ENSMUST00000118414 156 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Gm12447-201ENSMUST00000119110 470 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Gm15062-201ENSMUST00000120567 367 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Gm13237-201ENSMUST00000122151 635 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Gm14613-201ENSMUST00000122239 752 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC5.3□□□□□ -1.56
Sdc1P18828 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm24781-201ENSMUST00000157636 117 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Gm22094-201ENSMUST00000158976 117 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm22701-201ENSMUST00000175371 291 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm17828-201ENSMUST00000183380 799 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Mir378d-201ENSMUST00000184232 110 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Gm29470-201ENSMUST00000188007 696 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm44760-201ENSMUST00000206375 1173 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC5.3□□□□□ -1.56
Sdc1P18828 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm35638-201ENSMUST00000220724 652 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Olfr518-201ENSMUST00000059617 1002 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC5.3□□□□□ -1.56
Sdc1P18828 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm28112-201ENSMUST00000190898 1875 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Gm18878-201ENSMUST00000223071 1443 ntBASIC5.3□□□□□ -1.56
Sdc1P18828 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sdc1P18828 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.3□□□□□ -1.56
Sdc1P18828 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sdc1P18828 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Sdc1P18828 Akap5-202ENSMUST00000154078 6685 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
Sdc1P18828 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Rpl22-201ENSMUST00000103191 474 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Sdc1P18828 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Sdc1P18828 Gm24473-201ENSMUST00000104483 131 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Sdc1P18828 Gm15154-201ENSMUST00000117590 366 ntBASIC5.29□□□□□ -1.56
Sdc1P18828 Gm13265-201ENSMUST00000118090 421 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms