Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Gm5692-201ENSMUST00000187254 1057 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Gm18752-201ENSMUST00000192876 608 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Gm37493-201ENSMUST00000193167 433 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Gm45127-201ENSMUST00000205984 1015 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC7.75□□□□□ -1.17
Col1a1P11087 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Col1a1P11087 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col1a1P11087 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC7.75□□□□□ -1.17
Col1a1P11087 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC7.75□□□□□ -1.17
Col1a1P11087 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC7.75□□□□□ -1.17
Col1a1P11087 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col1a1P11087 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col1a1P11087 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col1a1P11087 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC7.75□□□□□ -1.17
Col1a1P11087 CT025642.2-201ENSMUST00000225009 1649 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col1a1P11087 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col1a1P11087 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col1a1P11087 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Col1a1P11087 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Col1a1P11087 Gm37735-201ENSMUST00000193995 1406 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Gm42866-201ENSMUST00000195919 3304 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Col1a1P11087 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col1a1P11087 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col1a1P11087 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col1a1P11087 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col1a1P11087 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Col1a1P11087 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col1a1P11087 Gm6181-201ENSMUST00000117187 264 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Gm8424-201ENSMUST00000117716 988 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Gm4789-201ENSMUST00000121708 1216 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Gm24065-201ENSMUST00000157487 264 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
Col1a1P11087 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Gm27024-201ENSMUST00000182561 755 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Mir6952-201ENSMUST00000185092 61 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Col1a1P11087 Gm17997-201ENSMUST00000211801 840 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Col1a1P11087 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col1a1P11087 Gm24454-201ENSMUST00000083349 132 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Gm25515-201ENSMUST00000083858 157 ntBASIC7.75□□□□□ -1.17
Col1a1P11087 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
Col1a1P11087 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 Ect2l-204ENSMUST00000208948 2862 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Col1a1P11087 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Col1a1P11087 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC7.74□□□□□ -1.17
Col1a1P11087 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 Gm12388-201ENSMUST00000119112 1887 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 Gm43099-201ENSMUST00000198943 5241 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 AC138284.1-201ENSMUST00000214258 3236 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 Veph1-201ENSMUST00000029419 6431 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC7.74□□□□□ -1.17
Col1a1P11087 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 Traf3-202ENSMUST00000060274 6896 ntTSL 5 BASIC7.74□□□□□ -1.17
Col1a1P11087 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Col1a1P11087 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 Gm14762-201ENSMUST00000105109 1771 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 Gm11624-201ENSMUST00000118579 1041 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
Col1a1P11087 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC7.74□□□□□ -1.17
Col1a1P11087 Gm23276-201ENSMUST00000157913 138 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC7.74□□□□□ -1.17
Col1a1P11087 Gm18199-201ENSMUST00000173820 835 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 Gm18191-201ENSMUST00000174624 824 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC7.74□□□□□ -1.17
Col1a1P11087 Gm7891-201ENSMUST00000190284 843 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.74□□□□□ -1.17
Col1a1P11087 Gm37548-201ENSMUST00000194519 3814 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 AC157822.1-201ENSMUST00000196643 80 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 Gm42619-201ENSMUST00000197564 1136 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 Mir6906-201ENSMUST00000198998 58 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 Gm17918-201ENSMUST00000205315 574 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC7.74□□□□□ -1.17
Col1a1P11087 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 Gm19033-201ENSMUST00000208516 964 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 AC154633.1-201ENSMUST00000223276 449 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 AC158954.1-201ENSMUST00000228272 1006 ntBASIC7.74□□□□□ -1.17
Col1a1P11087 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col1a1P11087 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Col1a1P11087 AC123629.1-201ENSMUST00000225669 1364 ntBASIC7.73□□□□□ -1.17
Col1a1P11087 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Col1a1P11087 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col1a1P11087 Gm9521-201ENSMUST00000206656 1516 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms