Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm9267-201ENSMUST00000222831 404 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 CT009711.2-201ENSMUST00000225352 934 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm44677-201ENSMUST00000209151 3739 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm37410-201ENSMUST00000193623 3039 ntBASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
Chmp6P0C0A3 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Mir708-201ENSMUST00000102189 109 ntBASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Gm23748-201ENSMUST00000104227 131 ntBASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Gm5319-201ENSMUST00000118965 873 ntBASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Gm12540-201ENSMUST00000121938 319 ntBASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Gm14353-201ENSMUST00000122200 869 ntBASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Gm17895-201ENSMUST00000194028 874 ntBASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Gm42752-201ENSMUST00000198394 1106 ntBASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Gm44227-201ENSMUST00000203576 241 ntBASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Gm45122-201ENSMUST00000206376 784 ntBASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 AC150661.1-201ENSMUST00000222563 495 ntBASIC7.2□□□□□ -1.26
Chmp6P0C0A3 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Gm24621-201ENSMUST00000082679 140 ntBASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Mir425-201ENSMUST00000083645 85 ntBASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Gm7731-201ENSMUST00000091759 470 ntBASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Akr1e1-202ENSMUST00000110691 3288 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Chmp6P0C0A3 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Wfdc15b-202ENSMUST00000109376 571 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Gm13400-201ENSMUST00000117436 380 ntBASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Gm11972-201ENSMUST00000118514 389 ntBASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Gm27804-201ENSMUST00000185135 119 ntBASIC7.19□□□□□ -1.26
Chmp6P0C0A3 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Gm18849-201ENSMUST00000189861 560 ntBASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Ighv8-3-201ENSMUST00000194985 295 ntBASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Gm34144-201ENSMUST00000197039 259 ntBASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Gm36448-201ENSMUST00000199916 438 ntBASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Gm42963-201ENSMUST00000202943 1217 ntBASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 AC101205.1-201ENSMUST00000227916 907 ntBASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Chmp6P0C0A3 Gm37183-201ENSMUST00000191712 3405 ntBASIC7.18□□□□□ -1.26
Chmp6P0C0A3 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC7.18□□□□□ -1.26
Chmp6P0C0A3 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms