Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm43719-201ENSMUST00000200088 2199 ntBASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Gm15901-201ENSMUST00000117663 941 ntBASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Gm12400-201ENSMUST00000120915 1003 ntBASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Gm38122-201ENSMUST00000192679 885 ntBASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Gm36939-201ENSMUST00000194889 439 ntBASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Mylf-ps-201ENSMUST00000222174 421 ntBASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Gm5612-201ENSMUST00000053326 375 ntBASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Gm8872-201ENSMUST00000197475 1341 ntBASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc180J3QNE4 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Ccdc180J3QNE4 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ccdc180J3QNE4 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
Ccdc180J3QNE4 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Gm4962-201ENSMUST00000199640 2977 ntBASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Atf6-201ENSMUST00000027974 7246 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Gm37420-201ENSMUST00000195332 2912 ntBASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Gm14870-201ENSMUST00000118414 156 ntBASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Gm12565-201ENSMUST00000119004 649 ntBASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Gm12181-201ENSMUST00000121448 531 ntBASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Gm23884-201ENSMUST00000122687 294 ntBASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Gm44221-201ENSMUST00000203552 388 ntBASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Gm3266-201ENSMUST00000217832 591 ntBASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Olfr923-204ENSMUST00000219798 1068 ntBASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Gm44185-201ENSMUST00000204539 3307 ntBASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Gm37772-201ENSMUST00000191635 1394 ntBASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Gm37234-201ENSMUST00000193259 1441 ntBASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ccdc180J3QNE4 Gm15930-201ENSMUST00000156603 2037 ntBASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 Gm31861-201ENSMUST00000204563 672 ntBASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ccdc180J3QNE4 Mir700-201ENSMUST00000102169 79 ntBASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Gm15194-201ENSMUST00000120453 434 ntBASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Gm12229-201ENSMUST00000120487 468 ntBASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Mir6367-201ENSMUST00000183385 102 ntBASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Gm43382-201ENSMUST00000198954 838 ntBASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Gm18467-201ENSMUST00000208805 434 ntBASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Gm4853-201ENSMUST00000119359 394 ntBASIC12.06□□□□□ -0.48
Ccdc180J3QNE4 Gm22599-201ENSMUST00000157597 132 ntBASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms