Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.59□□□□□ -1.35
H2afb2S4R1M3 Gm9985-201ENSMUST00000044101 510 ntBASIC6.59□□□□□ -1.35
H2afb2S4R1M3 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
H2afb2S4R1M3 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
H2afb2S4R1M3 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
H2afb2S4R1M3 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
H2afb2S4R1M3 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
H2afb2S4R1M3 CT010453.1-201ENSMUST00000226795 2201 ntBASIC6.59□□□□□ -1.35
H2afb2S4R1M3 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
H2afb2S4R1M3 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
H2afb2S4R1M3 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
H2afb2S4R1M3 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
H2afb2S4R1M3 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.59□□□□□ -1.35
H2afb2S4R1M3 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
H2afb2S4R1M3 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.59□□□□□ -1.36
H2afb2S4R1M3 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
H2afb2S4R1M3 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
H2afb2S4R1M3 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
H2afb2S4R1M3 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Gm45657-201ENSMUST00000211318 1349 ntBASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Gm4992-201ENSMUST00000120256 768 ntBASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Gm26321-201ENSMUST00000157740 242 ntBASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 n-R5s109-201ENSMUST00000179195 119 ntBASIC6.58□□□□□ -1.36
H2afb2S4R1M3 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Gm36991-201ENSMUST00000191800 648 ntBASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Gm37270-201ENSMUST00000194277 330 ntBASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Gm37285-201ENSMUST00000194465 1139 ntBASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Gm43377-201ENSMUST00000201640 455 ntBASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Gm3549-201ENSMUST00000203873 794 ntBASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Gm21731-201ENSMUST00000079524 489 ntBASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
H2afb2S4R1M3 Csta1-201ENSMUST00000096090 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 AC153143.2-201ENSMUST00000220999 1804 ntBASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Gm14513-201ENSMUST00000117403 123 ntBASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Gm14614-201ENSMUST00000119873 384 ntBASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Gm9064-201ENSMUST00000163579 566 ntBASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Mir7005-201ENSMUST00000185089 69 ntBASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Gm43383-201ENSMUST00000195981 469 ntBASIC6.57□□□□□ -1.36
H2afb2S4R1M3 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Gm45693-201ENSMUST00000211391 1157 ntBASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.57□□□□□ -1.36
H2afb2S4R1M3 AC132260.1-201ENSMUST00000225499 734 ntBASIC6.57□□□□□ -1.36
H2afb2S4R1M3 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Gm23238-201ENSMUST00000083007 164 ntBASIC6.57□□□□□ -1.36
H2afb2S4R1M3 n-R5s89-201ENSMUST00000083532 104 ntBASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
H2afb2S4R1M3 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms