Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm34294-201ENSMUST00000191912 4263 ntBASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 AC135083.2-201ENSMUST00000228599 1456 ntBASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm12439-201ENSMUST00000117162 365 ntBASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm17217-201ENSMUST00000166613 469 ntBASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Mir5100-201ENSMUST00000174993 64 ntBASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm24111-201ENSMUST00000175491 97 ntBASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm8245-201ENSMUST00000182434 987 ntBASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 C030032O16Rik-201ENSMUST00000196427 716 ntBASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm43595-201ENSMUST00000196464 1071 ntBASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm10297-201ENSMUST00000207136 651 ntBASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Ddx56Q9D0R4 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Olfr1122-202ENSMUST00000215371 5036 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Kmo-201ENSMUST00000040250 2695 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm37169-201ENSMUST00000195599 4161 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm25546-201ENSMUST00000103977 132 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm26416-201ENSMUST00000104280 134 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm15105-201ENSMUST00000117777 204 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm13137-201ENSMUST00000118035 345 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm12804-201ENSMUST00000121030 999 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm16284-201ENSMUST00000140995 400 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm15279-201ENSMUST00000155593 288 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm18799-201ENSMUST00000189104 913 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm37884-201ENSMUST00000191857 818 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm38330-201ENSMUST00000192743 959 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm18599-201ENSMUST00000206729 1125 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm45701-201ENSMUST00000212049 235 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 AC167202.1-201ENSMUST00000219027 331 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm32899-201ENSMUST00000219694 207 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm5080-201ENSMUST00000220341 743 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm19238-201ENSMUST00000221936 1260 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 AC132590.1-201ENSMUST00000224374 1164 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 CT009539.1-201ENSMUST00000226465 220 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gkn1-201ENSMUST00000032129 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Gm5436-201ENSMUST00000058103 643 ntBASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC7.32□□□□□ -1.24
Ddx56Q9D0R4 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms