Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm22781-201ENSMUST00000104083 137 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Mir290a-201ENSMUST00000104627 83 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm13566-201ENSMUST00000117428 1142 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm11903-201ENSMUST00000118958 727 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm13463-201ENSMUST00000119020 233 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm15275-201ENSMUST00000154752 347 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm22523-201ENSMUST00000158696 100 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm24176-201ENSMUST00000158928 121 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm29160-201ENSMUST00000190094 699 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm35323-201ENSMUST00000191836 499 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm2975-201ENSMUST00000209710 820 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm45888-201ENSMUST00000212348 1229 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm19011-201ENSMUST00000221777 808 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Gm23238-201ENSMUST00000083007 164 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Mir296-201ENSMUST00000083587 79 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
Cdk5rap3Q99LM2 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm42613-201ENSMUST00000199975 1931 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm25083-201ENSMUST00000102319 92 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Serpina3h-202ENSMUST00000116393 1226 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm7113-201ENSMUST00000120477 958 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm14070-201ENSMUST00000120773 428 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm13024-201ENSMUST00000121756 718 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm16112-201ENSMUST00000159075 382 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm26381-201ENSMUST00000174895 92 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm20615-201ENSMUST00000177503 705 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm27970-201ENSMUST00000184854 407 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm4785-201ENSMUST00000191025 751 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm21054-201ENSMUST00000203981 380 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm17997-201ENSMUST00000211801 840 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 AC154515.3-201ENSMUST00000225081 1159 ntBASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Cdk5rap3Q99LM2 Gm5436-201ENSMUST00000058103 643 ntBASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms