Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm16200-201ENSMUST00000120385 331 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm14613-201ENSMUST00000122239 752 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm8648-201ENSMUST00000122457 221 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Pde1c-208ENSMUST00000170774 2132 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm18199-201ENSMUST00000173820 835 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm18191-201ENSMUST00000174624 824 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm7891-201ENSMUST00000190284 843 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm37517-201ENSMUST00000194004 1289 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm43354-201ENSMUST00000196862 346 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm9519-201ENSMUST00000206108 1337 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 AC166358.9-201ENSMUST00000220653 375 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm35619-201ENSMUST00000222548 600 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 AC158521.1-202ENSMUST00000224352 645 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 AC159205.4-201ENSMUST00000225964 704 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm21731-201ENSMUST00000079524 489 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm43022-201ENSMUST00000197067 4268 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm44194-201ENSMUST00000204222 3229 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm37410-201ENSMUST00000193623 3039 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm5401-201ENSMUST00000122444 365 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm25178-201ENSMUST00000122633 325 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm16269-201ENSMUST00000160532 409 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Mir3097-201ENSMUST00000175356 67 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm38131-201ENSMUST00000192449 430 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm17908-201ENSMUST00000205552 1256 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm7802-201ENSMUST00000216464 262 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm9321-201ENSMUST00000221179 778 ntBASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Col6a6Q8C6K9 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Gm44185-201ENSMUST00000204539 3307 ntBASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Gm23440-201ENSMUST00000104299 130 ntBASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Gm8860-201ENSMUST00000193160 445 ntBASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Gm5853-201ENSMUST00000197183 632 ntBASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Gm43945-201ENSMUST00000203595 754 ntBASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Gm37321-201ENSMUST00000195742 1872 ntBASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Col6a6Q8C6K9 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms