Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 AC122305.2-201ENSMUST00000215148 834 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm9315-201ENSMUST00000222696 908 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Olfr1262-201ENSMUST00000061701 1024 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Adgrg4-201ENSMUST00000096431 1137 ntTSL 2 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Prelp-201ENSMUST00000048432 3615 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Omg-201ENSMUST00000164465 2228 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Usp39Q3TIX9 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.73□□□□□ -1.33
Usp39Q3TIX9 Gm44769-201ENSMUST00000206120 2809 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm20768-201ENSMUST00000199527 2338 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm18830-201ENSMUST00000199036 1396 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm22543-201ENSMUST00000104347 94 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm12740-201ENSMUST00000118794 308 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm13130-201ENSMUST00000119195 1166 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm13735-201ENSMUST00000120217 670 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm11257-201ENSMUST00000121313 315 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm14728-201ENSMUST00000122196 492 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm8192-201ENSMUST00000182196 958 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Mir8094-201ENSMUST00000183361 117 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Mir6921-201ENSMUST00000183719 80 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm6472-202ENSMUST00000187973 582 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm20915-201ENSMUST00000191575 663 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm45042-201ENSMUST00000207377 211 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm7419-201ENSMUST00000209962 925 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Snora21-201ENSMUST00000082967 137 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Gm19801-201ENSMUST00000218231 1882 ntBASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Usp39Q3TIX9 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Usp39Q3TIX9 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Usp39Q3TIX9 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Usp39Q3TIX9 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Usp39Q3TIX9 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Usp39Q3TIX9 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.71□□□□□ -1.33
Usp39Q3TIX9 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Usp39Q3TIX9 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Usp39Q3TIX9 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Usp39Q3TIX9 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC6.71□□□□□ -1.34
Usp39Q3TIX9 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms