Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Samd15-201ENSMUST00000169669 1194 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm2878-201ENSMUST00000170173 486 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm5459-201ENSMUST00000171235 798 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm6467-201ENSMUST00000171547 609 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm20625-201ENSMUST00000177065 698 ntTSL 3 BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm27043-201ENSMUST00000182807 958 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Mir6403-201ENSMUST00000185007 129 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm18301-201ENSMUST00000185261 888 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm5251-201ENSMUST00000188959 472 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm20936-201ENSMUST00000191049 658 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm36935-201ENSMUST00000192526 292 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm38233-201ENSMUST00000194259 807 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm43774-201ENSMUST00000196327 878 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm42591-201ENSMUST00000197249 700 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm43247-201ENSMUST00000198638 481 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm43345-201ENSMUST00000199484 269 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm9245-201ENSMUST00000200528 983 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC5.81□□□□□ -1.48
Trim63Q38HM4 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm44770-201ENSMUST00000205395 1264 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm29725-201ENSMUST00000206614 407 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm45739-201ENSMUST00000213094 388 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm40853-201ENSMUST00000221342 582 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 AC122309.1-201ENSMUST00000226945 421 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 AC131586.4-201ENSMUST00000228424 668 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim63Q38HM4 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Olfr38-201ENSMUST00000074499 954 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Olfr1178-201ENSMUST00000075640 972 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
Trim63Q38HM4 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gm42531-201ENSMUST00000201648 4048 ntBASIC5.81□□□□□ -1.48
Trim63Q38HM4 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Trim63Q38HM4 Gpr33-201ENSMUST00000040161 1388 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm37535-201ENSMUST00000194442 2365 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Crbn-202ENSMUST00000113239 2084 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 n-R5s72-201ENSMUST00000104518 119 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm12713-201ENSMUST00000118404 764 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm12448-201ENSMUST00000118852 655 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm13359-201ENSMUST00000119000 695 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm12813-201ENSMUST00000119615 902 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm15238-201ENSMUST00000119938 1296 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm11480-201ENSMUST00000120214 659 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm14563-201ENSMUST00000120571 354 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm14528-201ENSMUST00000120615 231 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm11761-201ENSMUST00000121392 445 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm13546-202ENSMUST00000138444 989 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Itih5l-ps-202ENSMUST00000148862 808 ntTSL 3 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm25962-201ENSMUST00000157173 168 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm25898-201ENSMUST00000158303 106 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Snca-202ENSMUST00000163779 1188 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm22347-201ENSMUST00000180276 132 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 BC025446-202ENSMUST00000185307 758 ntAPPRIS P5 TSL 2 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Pantr1-211ENSMUST00000186656 647 ntTSL 3 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 4930512B01Rik-202ENSMUST00000188608 983 ntTSL 3 BASIC5.8□□□□□ -1.48
Trim63Q38HM4 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm21715-201ENSMUST00000191056 694 ntBASIC5.8□□□□□ -1.48
Trim63Q38HM4 Gm37193-201ENSMUST00000193087 513 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms