Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Msx2Q03358 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC6.99□□□□□ -1.29
Msx2Q03358 Gm13195-201ENSMUST00000117229 261 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm13137-201ENSMUST00000118035 345 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm15040-201ENSMUST00000118561 1241 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm13006-201ENSMUST00000118683 214 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm11404-201ENSMUST00000120872 494 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Msx2Q03358 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Msx2Q03358 Gm23587-201ENSMUST00000157658 84 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm26408-201ENSMUST00000157672 127 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm17038-201ENSMUST00000166586 494 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm8164-201ENSMUST00000169120 1192 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Svs5-201ENSMUST00000017148 628 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Msx2Q03358 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Msx2Q03358 Gm5205-201ENSMUST00000182253 1003 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC6.99□□□□□ -1.29
Msx2Q03358 Gm29073-201ENSMUST00000185563 664 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm21742-201ENSMUST00000189352 548 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm19224-201ENSMUST00000190477 793 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm29165-201ENSMUST00000190655 664 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm29211-201ENSMUST00000191470 664 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC6.99□□□□□ -1.29
Msx2Q03358 Gm37463-201ENSMUST00000193819 796 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm7897-201ENSMUST00000193981 554 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm38337-201ENSMUST00000193986 599 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm37908-201ENSMUST00000195828 470 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
Msx2Q03358 Gm40319-201ENSMUST00000199785 481 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Msx2Q03358 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm20074-201ENSMUST00000208144 484 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm18851-201ENSMUST00000210087 1058 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.99□□□□□ -1.29
Msx2Q03358 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC6.99□□□□□ -1.29
Msx2Q03358 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Msx2Q03358 AC153957.1-201ENSMUST00000215235 229 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm4977-201ENSMUST00000215709 1262 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm18292-201ENSMUST00000216673 919 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm4898-201ENSMUST00000218519 832 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC6.99□□□□□ -1.29
Msx2Q03358 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC6.99□□□□□ -1.29
Msx2Q03358 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 AC117797.2-201ENSMUST00000224419 531 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 AC123867.1-201ENSMUST00000224990 816 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 AC131997.2-201ENSMUST00000227452 362 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Msx2Q03358 Klk4-201ENSMUST00000007161 1249 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Msx2Q03358 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
Msx2Q03358 Ubtfl1-202ENSMUST00000164441 2639 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Msx2Q03358 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.99□□□□□ -1.29
Msx2Q03358 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Msx2Q03358 Pcdh15-215ENSMUST00000131321 6926 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Msx2Q03358 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
Msx2Q03358 Gm4073-201ENSMUST00000176792 3500 ntBASIC6.99□□□□□ -1.29
Msx2Q03358 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Msx2Q03358 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Msx2Q03358 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Msx2Q03358 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Msx2Q03358 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Msx2Q03358 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Msx2Q03358 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
Msx2Q03358 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Msx2Q03358 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Msx2Q03358 Slc26a7-201ENSMUST00000042221 5165 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Msx2Q03358 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Msx2Q03358 Tfpi-201ENSMUST00000028487 1492 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Msx2Q03358 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Msx2Q03358 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Msx2Q03358 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Msx2Q03358 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Msx2Q03358 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Msx2Q03358 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.98□□□□□ -1.29
Msx2Q03358 Ldhc-201ENSMUST00000014545 1370 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Msx2Q03358 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Msx2Q03358 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.98□□□□□ -1.29
Msx2Q03358 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.98□□□□□ -1.29
Msx2Q03358 Gm10862-201ENSMUST00000193956 3350 ntBASIC6.98□□□□□ -1.29
Msx2Q03358 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Msx2Q03358 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC6.98□□□□□ -1.29
Msx2Q03358 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.98□□□□□ -1.29
Msx2Q03358 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Msx2Q03358 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC6.98□□□□□ -1.29
Msx2Q03358 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Msx2Q03358 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC6.98□□□□□ -1.29
Msx2Q03358 Gm11357-201ENSMUST00000119758 954 ntBASIC6.98□□□□□ -1.29
Msx2Q03358 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.98□□□□□ -1.29
Msx2Q03358 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC6.98□□□□□ -1.29
Msx2Q03358 Gm14135-201ENSMUST00000135438 591 ntTSL 3 BASIC6.98□□□□□ -1.29
Msx2Q03358 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC6.98□□□□□ -1.29
Msx2Q03358 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Msx2Q03358 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC6.98□□□□□ -1.29
Msx2Q03358 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC6.98□□□□□ -1.29
Msx2Q03358 Gm23740-201ENSMUST00000157385 100 ntBASIC6.98□□□□□ -1.29
Msx2Q03358 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC6.98□□□□□ -1.29
Msx2Q03358 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC6.98□□□□□ -1.29
Msx2Q03358 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Msx2Q03358 Samd15-201ENSMUST00000169669 1194 ntBASIC6.98□□□□□ -1.29
Msx2Q03358 Gm17051-201ENSMUST00000170787 487 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms