Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm43557-201ENSMUST00000197100 2370 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Cdh11P55288 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Cdh11P55288 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm37772-201ENSMUST00000191635 1394 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.09□□□□□ -1.43
Cdh11P55288 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Cdh11P55288 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm25498-201ENSMUST00000104424 129 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm13196-201ENSMUST00000118297 379 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm15129-201ENSMUST00000119673 279 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm15081-201ENSMUST00000119794 844 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm26025-201ENSMUST00000158655 271 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm16113-201ENSMUST00000159629 372 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm16107-201ENSMUST00000162523 862 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm17217-201ENSMUST00000166613 469 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm4956-202ENSMUST00000178869 672 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm25617-201ENSMUST00000179548 133 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm27014-201ENSMUST00000182658 937 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm27158-201ENSMUST00000183813 238 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Mir6337-201ENSMUST00000184194 105 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm21728-201ENSMUST00000188442 695 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm21889-201ENSMUST00000188487 695 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm9114-201ENSMUST00000188558 997 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm20932-201ENSMUST00000189115 694 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm21920-201ENSMUST00000190042 695 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh11P55288 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm30517-201ENSMUST00000197350 772 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm25617-202ENSMUST00000198387 132 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm43928-201ENSMUST00000203737 409 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm8479-201ENSMUST00000203825 718 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm6290-201ENSMUST00000207666 1158 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm18363-201ENSMUST00000221671 730 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 AC133598.3-204ENSMUST00000224260 767 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Cdh11P55288 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm24451-201ENSMUST00000083353 133 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Cdh11P55288 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Cdh11P55288 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 AC129308.2-203ENSMUST00000224109 2385 ntBASIC6.09□□□□□ -1.43
Cdh11P55288 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.09□□□□□ -1.44
Cdh11P55288 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Cdh11P55288 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cdh11P55288 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC6.09□□□□□ -1.44
Cdh11P55288 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Cdh11P55288 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Cdh11P55288 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdh11P55288 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh11P55288 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh11P55288 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.08□□□□□ -1.44
Cdh11P55288 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.08□□□□□ -1.44
Cdh11P55288 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Cdh11P55288 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh11P55288 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh11P55288 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh11P55288 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdh11P55288 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh11P55288 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh11P55288 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh11P55288 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Cdh11P55288 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Cdh11P55288 Mir708-201ENSMUST00000102189 109 ntBASIC6.08□□□□□ -1.44
Cdh11P55288 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdh11P55288 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.08□□□□□ -1.44
Cdh11P55288 Gm12375-201ENSMUST00000119331 921 ntBASIC6.08□□□□□ -1.44
Cdh11P55288 Gm14489-201ENSMUST00000120868 901 ntBASIC6.08□□□□□ -1.44
Cdh11P55288 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh11P55288 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdh11P55288 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh11P55288 Gm26607-201ENSMUST00000180661 867 ntBASIC6.08□□□□□ -1.44
Cdh11P55288 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Cdh11P55288 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.08□□□□□ -1.44
Cdh11P55288 Gm3549-201ENSMUST00000203873 794 ntBASIC6.08□□□□□ -1.44
Cdh11P55288 Gm44111-201ENSMUST00000204649 399 ntBASIC6.08□□□□□ -1.44
Cdh11P55288 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms